Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYCE2Q6PIF2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.09□□□□□ -1.59
SYCE2Q6PIF2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SYCE2Q6PIF2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SYCE2Q6PIF2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SYCE2Q6PIF2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.09□□□□□ -1.6
SYCE2Q6PIF2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 MTND4P23-201ENST00000447723 1363 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNA5SP388-201ENST00000362584 119 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNU6-224P-201ENST00000384055 107 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNU5A-2P-201ENST00000384337 116 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 Y_RNA.578-201ENST00000390903 88 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 ATF1P1-201ENST00000406040 927 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNA5SP345-201ENST00000410646 108 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 MTCO1P17-201ENST00000411522 491 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC092638.1-201ENST00000411966 1275 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CCDC58P2-201ENST00000417131 366 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 HIGD1AP12-201ENST00000427832 281 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 MTCO1P45-201ENST00000431457 267 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC009263.1-201ENST00000441193 1239 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 HMGB3P6-201ENST00000444896 598 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC004980.3-201ENST00000447046 365 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 EPS15P1-201ENST00000448836 336 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC079203.1-201ENST00000487972 404 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC073358.1-201ENST00000505671 684 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC093840.1-201ENST00000511599 336 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL109766.1-201ENST00000555080 552 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC245505.1-201ENST00000556398 224 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC023575.1-201ENST00000580510 358 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 DUXAP11-201ENST00000603858 526 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC112230.1-201ENST00000604342 547 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL592221.1-201ENST00000605266 382 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC015849.2-201ENST00000605738 409 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNU4-89P-201ENST00000607443 133 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 OR2BH1P-201ENST00000608850 864 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL138478.1-201ENST00000612252 832 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC008498.1-201ENST00000613012 531 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL049794.2-201ENST00000616301 365 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AL356121.2-201ENST00000624715 780 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 SGO1P2-201ENST00000429458 1589 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.08□□□□□ -1.6
SYCE2Q6PIF2 AC006042.3-201ENST00000454684 1469 ntBASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYCE2Q6PIF2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms