Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 RPL21P131-201ENST00000497298 483 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MTND4LP2-201ENST00000502312 285 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 OR5H4P-201ENST00000510851 923 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC124293.1-201ENST00000530034 493 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 BGLT3-201ENST00000564523 994 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MTATP6P24-201ENST00000576835 677 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC091042.1-201ENST00000579213 173 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MIR5708-201ENST00000579723 85 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC090312.2-201ENST00000582687 378 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC002487.1-201ENST00000604565 994 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC010680.4-201ENST00000605334 543 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AP001002.2-201ENST00000625137 386 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AL356489.2-201ENST00000566968 3528 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC015813.6-201ENST00000624409 5808 ntBASIC4.03□□□□□ -1.77
PDLIM3Q53GG5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 DCAF13P3-201ENST00000561147 1334 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 RN7SKP95-201ENST00000362860 303 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 RN7SKP44-201ENST00000363602 316 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 U3.15-201ENST00000365398 212 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 RNU6-549P-201ENST00000384433 107 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 RNU6-1242P-201ENST00000391052 103 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 SNORA77-201ENST00000408716 125 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 RPL21P110-201ENST00000433345 446 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL035246.1-201ENST00000433554 1255 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 KNOP1P3-201ENST00000446933 426 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC092647.2-201ENST00000452998 253 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL691482.1-201ENST00000453255 87 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 BX248409.1-201ENST00000455497 255 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC005410.1-202ENST00000460347 485 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 PRDX3P4-201ENST00000470828 747 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC084024.2-201ENST00000503480 791 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC111000.3-201ENST00000508057 576 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 HMGB3P13-201ENST00000511263 607 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 CYCSP40-201ENST00000575927 294 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 MIR4298-201ENST00000584380 73 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 SNORD91B-202ENST00000608459 222 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC024941.1-201ENST00000612250 334 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC008147.4-201ENST00000617570 1204 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC018926.3-201ENST00000618841 406 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AL158163.2-201ENST00000619110 700 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC134882.1-201ENST00000603738 1676 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 AC099786.3-201ENST00000565735 1410 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 Z98755.1-201ENST00000407015 1384 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 MTCO1P6-201ENST00000481192 1384 ntBASIC4.02□□□□□ -1.77
PDLIM3Q53GG5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms