Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC107953.1-201ENST00000522216 297 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDH1Q08174 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AP003072.2-201ENST00000527756 676 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC020661.2-201ENST00000560114 134 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 HMGB1P6-201ENST00000569046 646 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 MIR3118-1-201ENST00000581787 76 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC010525.2-201ENST00000590920 195 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC008555.7-201ENST00000605008 583 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 C2orf27A-204ENST00000623058 969 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC010325.3-201ENST00000641084 394 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH1Q08174 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDH1Q08174 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH1Q08174 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH1Q08174 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AL592429.1-201ENST00000403909 1473 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH1Q08174 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 MTND5P3-201ENST00000438536 1800 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH1Q08174 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 NACAP2-201ENST00000318548 624 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH1Q08174 RNU6-853P-201ENST00000364306 107 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 RNU6-343P-201ENST00000364709 104 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 RNU6-108P-201ENST00000365558 107 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 RNU6-921P-201ENST00000384361 107 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 RNU6-738P-201ENST00000384531 106 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 RPL32P23-201ENST00000397237 405 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 RPL35AP24-201ENST00000413846 330 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC009161.1-201ENST00000417306 376 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AL807761.1-201ENST00000417622 171 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC099782.1-201ENST00000425889 474 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 RBMY2QP-201ENST00000429799 1147 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH1Q08174 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC112187.1-201ENST00000455837 479 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 SLC25A51P1-201ENST00000468432 871 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC108693.1-201ENST00000496068 432 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH1Q08174 HMGN1P16-201ENST00000508308 283 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC112206.3-201ENST00000514578 389 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AP002373.2-201ENST00000541631 1060 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDH1Q08174 MIR4701-201ENST00000583094 63 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 GLYATL1P2-202ENST00000588046 902 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AP001823.1-201ENST00000604056 1003 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC004853.1-201ENST00000604902 698 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 Z84480.1-201ENST00000605131 311 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC116312.1-201ENST00000606841 314 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC141002.1-201ENST00000607025 279 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AP001437.1-201ENST00000608783 456 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AL122023.1-201ENST00000622847 530 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 AC091953.2-201ENST00000623979 160 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH1Q08174 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH1Q08174 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PCDH1Q08174 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDH1Q08174 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH1Q08174 AC090229.1-201ENST00000590983 1609 ntBASIC5.95□□□□□ -1.46
PCDH1Q08174 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms