Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.55□□□□□ -1.68
SRSF4Q08170 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 AC003973.3-201ENST00000624863 2822 ntBASIC4.55□□□□□ -1.68
SRSF4Q08170 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.55□□□□□ -1.68
SRSF4Q08170 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 AL079343.1-201ENST00000572358 1771 ntBASIC4.55□□□□□ -1.68
SRSF4Q08170 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.55□□□□□ -1.68
SRSF4Q08170 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRSF4Q08170 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.55□□□□□ -1.68
SRSF4Q08170 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC093591.2-201ENST00000565254 3843 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.54□□□□□ -1.68
SRSF4Q08170 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC008033.1-201ENST00000216407 1162 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 OR9G4-201ENST00000302957 984 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SRSF4Q08170 Y_RNA.61-201ENST00000362835 102 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 RNA5SP443-201ENST00000363083 132 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 Y_RNA.311-201ENST00000365068 96 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 RNU6-244P-201ENST00000391028 104 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 OR6C69P-201ENST00000394268 893 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 RN7SKP16-201ENST00000410180 299 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC138393.2-201ENST00000414742 246 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.54□□□□□ -1.68
SRSF4Q08170 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 MRPS36P1-201ENST00000421291 307 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC007161.1-204ENST00000423039 460 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 MTND1P14-201ENST00000427400 950 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 MTCO1P54-201ENST00000430139 712 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC000111.3-201ENST00000433478 193 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AL031584.1-201ENST00000447169 754 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 COX6CP18-201ENST00000448769 222 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 MTND1P16-201ENST00000465177 898 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC099521.1-201ENST00000482557 334 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 RPL9P6-201ENST00000492764 598 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC087808.1-201ENST00000520501 361 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC124947.2-202ENST00000552735 133 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 PSMB7P1-201ENST00000556349 514 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 NIFKP8-201ENST00000560500 874 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.54□□□□□ -1.68
SRSF4Q08170 FGF7P1-201ENST00000582820 288 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.54□□□□□ -1.68
SRSF4Q08170 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AC009994.1-201ENST00000606889 253 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC092954.2-201ENST00000609103 430 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 FAM157B-203ENST00000639350 358 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC073869.8-201ENST00000641806 335 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 LINC01739-205ENST00000641890 573 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 AC021242.1-201ENST00000507315 2035 ntBASIC4.54□□□□□ -1.68
SRSF4Q08170 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SRSF4Q08170 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.54□□□□□ -1.68
SRSF4Q08170 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SRSF4Q08170 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRSF4Q08170 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRSF4Q08170 BTBD10P1-201ENST00000549824 1352 ntBASIC4.53□□□□□ -1.68
SRSF4Q08170 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRSF4Q08170 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.53□□□□□ -1.68
SRSF4Q08170 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.53□□□□□ -1.68
SRSF4Q08170 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SRSF4Q08170 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.53□□□□□ -1.68
SRSF4Q08170 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRSF4Q08170 Y_RNA.18-201ENST00000362461 102 ntBASIC4.53□□□□□ -1.68
SRSF4Q08170 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.53□□□□□ -1.68
SRSF4Q08170 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SRSF4Q08170 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRSF4Q08170 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SRSF4Q08170 FGF7P8-201ENST00000402994 292 ntBASIC4.53□□□□□ -1.68
SRSF4Q08170 OR51A5P-201ENST00000415429 942 ntBASIC4.53□□□□□ -1.68
SRSF4Q08170 AL139148.1-201ENST00000427122 680 ntBASIC4.53□□□□□ -1.68
SRSF4Q08170 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.53□□□□□ -1.68
SRSF4Q08170 USP12PX-201ENST00000432383 1057 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms