Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3AP84243 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
H3F3AP84243 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
H3F3AP84243 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 SNORA57.1-201ENST00000391227 145 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 CASKP1-201ENST00000412870 582 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3AP84243 MTCYBP7-201ENST00000419540 1134 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3AP84243 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 AL500522.2-201ENST00000448562 343 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 RPS20P21-201ENST00000466859 343 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC021205.1-201ENST00000468797 348 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC010683.1-201ENST00000473673 378 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
H3F3AP84243 RN7SL132P-201ENST00000478131 296 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 RN7SL323P-201ENST00000494712 295 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
H3F3AP84243 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3AP84243 AC005798.1-201ENST00000513715 387 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 SCARNA14-201ENST00000516903 136 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3AP84243 AC084824.1-201ENST00000550917 1005 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC007423.1-201ENST00000605009 627 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC022960.2-201ENST00000616300 666 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 FP236240.3-201ENST00000623061 327 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 AC017002.4-201ENST00000604721 1525 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 AC007342.7-201ENST00000624610 2337 ntBASIC3.43□□□□□ -1.86
H3F3AP84243 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3AP84243 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3AP84243 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3AP84243 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
H3F3AP84243 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
H3F3AP84243 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3AP84243 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 RNA5SP479-201ENST00000364858 117 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
H3F3AP84243 AC136624.1-201ENST00000400791 413 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 Z98941.1-201ENST00000407764 100 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 RN7SKP222-201ENST00000410651 315 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 SMC4P1-201ENST00000414479 527 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 TCEA1P4-201ENST00000415066 844 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 RPS12P23-201ENST00000419579 400 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3AP84243 NPM1P34-201ENST00000428821 893 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 ELOCP3-201ENST00000439303 348 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 CALM1P2-201ENST00000452941 448 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 AL161747.1-201ENST00000480068 358 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 LARP7P4-201ENST00000481075 878 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC093267.1-201ENST00000489176 961 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC002456.2-201ENST00000509356 380 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 RNU6-352P-201ENST00000516908 107 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3AP84243 SUMO2P20-201ENST00000520803 283 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 AL049844.2-201ENST00000604280 628 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AL451086.1-201ENST00000605596 223 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 SNORA35B-201ENST00000607417 129 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC099676.1-201ENST00000608886 657 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AL731566.2-201ENST00000618971 317 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 AC244205.2-202ENST00000635781 342 ntBASIC3.42□□□□□ -1.86
H3F3AP84243 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3AP84243 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3AP84243 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3AP84243 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3AP84243 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3AP84243 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3AP84243 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3AP84243 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 RNU6-167P-201ENST00000384292 106 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 FABP12P1-201ENST00000401911 322 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 MIR1193-201ENST00000408109 78 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms