Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 S100A11P1-201ENST00000477525 312 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 RPS4XP13-201ENST00000483219 789 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AL035404.1-201ENST00000497982 568 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PRKDCP78527 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKDCP78527 MIR7851-201ENST00000610611 160 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AC127502.3-201ENST00000636170 1206 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 NDUFB1P1-201ENST00000435191 180 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 DEFB109F-201ENST00000491870 277 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 TNPO1P3-201ENST00000436471 2662 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PRKDCP78527 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 RPL36AP10-201ENST00000421785 322 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 CBX1P4-201ENST00000439415 457 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AL136097.1-201ENST00000456945 913 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 snoU13.26-201ENST00000459452 105 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 RPS29P26-201ENST00000477483 171 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PRKDCP78527 RNU6-579P-201ENST00000516879 102 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 MIR3936-201ENST00000584304 110 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AL353600.1-201ENST00000608148 251 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC004832.5-201ENST00000608677 401 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC104623.2-202ENST00000623477 4002 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PRKDCP78527 RPL23AP25-201ENST00000430973 463 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 IGLV3-26-201ENST00000520756 302 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.5□□□□□ -2.01
PRKDCP78527 MIR4425-201ENST00000580572 84 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 AC079089.3-201ENST00000603094 673 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.5□□□□□ -2.01
PRKDCP78527 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PRKDCP78527 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC2.5□□□□□ -2.01
PRKDCP78527 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.5□□□□□ -2.01
PRKDCP78527 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 Y_RNA.226-201ENST00000364337 114 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AL356535.1-201ENST00000440335 398 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC140076.1-201ENST00000449897 361 ntBASIC2.5□□□□□ -2.01
PRKDCP78527 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKDCP78527 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
PRKDCP78527 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.5□□□□□ -2.01
PRKDCP78527 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PRKDCP78527 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKDCP78527 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PRKDCP78527 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 DYNLL1P7-201ENST00000429273 258 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC011742.1-201ENST00000431448 434 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 HMGN2P7-201ENST00000456186 273 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC025554.1-201ENST00000505641 188 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.49□□□□□ -2.01
PRKDCP78527 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC069209.1-201ENST00000619282 651 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 AC004656.1-201ENST00000568479 4951 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 SNORA67.4-201ENST00000384688 142 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 MIR195-201ENST00000385194 87 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 PRELID3BP10-201ENST00000431957 584 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKDCP78527 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC027287.1-201ENST00000553115 1453 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms