Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 RPS3AP4-201ENST00000555161 764 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC068135.2-201ENST00000569293 1028 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 MIR3913-1-201ENST00000577744 102 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.86□□□□□ -1.63
CLRN1P58418 BNIP3P11-201ENST00000603878 563 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC112187.2-201ENST00000604345 283 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC097468.3-201ENST00000607956 456 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AP000894.4-201ENST00000610185 483 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AL118522.2-201ENST00000616045 615 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 RNA5SP439-201ENST00000617595 124 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 AL008636.1-201ENST00000625038 1018 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 AC026523.2-201ENST00000625039 7739 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC095050.2-201ENST00000510748 1458 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC006206.1-201ENST00000544842 3387 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 TMSB4XP4-201ENST00000323496 618 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 RNU5E-4P-201ENST00000364931 120 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 Y_RNA.598-201ENST00000410480 95 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 BMS1P17-202ENST00000416720 316 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 MRPS21P2-201ENST00000424704 264 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 IPMKP1-201ENST00000425988 855 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 MTND6P12-201ENST00000428247 522 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 MTND3P21-201ENST00000433774 331 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 YWHAZP8-201ENST00000436935 731 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLRN1P58418 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 RN7SL51P-201ENST00000468230 285 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC108941.1-201ENST00000502853 530 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC093809.1-201ENST00000509155 340 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC068587.4-201ENST00000533893 186 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC018552.1-201ENST00000562099 811 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 SULT1C2P1-202ENST00000562418 459 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 EIF5A2P1-201ENST00000564027 460 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.85□□□□□ -1.63
CLRN1P58418 AC104785.1-201ENST00000603220 588 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AL133338.2-201ENST00000604292 736 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AC010632.3-201ENST00000611377 369 ntBASIC4.85□□□□□ -1.63
CLRN1P58418 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.85□□□□□ -1.63
CLRN1P58418 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms