Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC093424.1-201ENST00000604999 338 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 Z99289.3-201ENST00000605586 594 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.79□□□□□ -1.64
HDAC4P56524 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.79□□□□□ -1.64
HDAC4P56524 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 BX649567.1-201ENST00000642071 1134 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HDAC4P56524 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC4P56524 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC4P56524 SEPT7P7-201ENST00000420492 1301 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC4P56524 RNU6-353P-201ENST00000364266 108 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 SNORD96B-201ENST00000386148 79 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 RPS16P5-201ENST00000406501 404 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 RNU4-22P-201ENST00000411058 166 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC4P56524 RPS7P9-201ENST00000414704 586 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.78□□□□□ -1.64
HDAC4P56524 AL035246.1-201ENST00000433554 1255 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.78□□□□□ -1.64
HDAC4P56524 AL138878.2-201ENST00000440581 1241 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 CEACAMP6-201ENST00000452007 574 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 DNAJC19P8-201ENST00000452887 259 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 RPS29P33-201ENST00000456717 146 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC010326.1-201ENST00000462726 602 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC079203.1-201ENST00000487972 404 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 RPL21P131-201ENST00000497298 483 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 MTCYBP35-201ENST00000503630 1137 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC4P56524 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.78□□□□□ -1.64
HDAC4P56524 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC4P56524 RNA5SP446-201ENST00000515955 82 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC010306.1-201ENST00000523223 1117 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC090819.1-201ENST00000523800 1111 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC4P56524 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC4P56524 TOMM20P2-201ENST00000540082 421 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC4P56524 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC4P56524 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC4P56524 AC234772.3-201ENST00000602277 528 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC009948.4-201ENST00000604692 675 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 MIR6780A-201ENST00000615089 68 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 AC123767.1-202ENST00000620407 817 ntBASIC4.78□□□□□ -1.64
HDAC4P56524 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HDAC4P56524 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC4P56524 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 PNPT1P2-201ENST00000456768 2050 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC4P56524 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.77□□□□□ -1.65
HDAC4P56524 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 OR52E6-202ENST00000379946 954 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 SNORA70F-201ENST00000384142 135 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 MIR23A-201ENST00000385245 73 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 RNA5SP397-201ENST00000391323 118 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 BTF3P8-201ENST00000414577 526 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 XKRYP1-201ENST00000423438 492 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 C1DP1-201ENST00000426049 402 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 XKRYP2-201ENST00000432915 492 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 RPS26P30-201ENST00000443431 335 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AL929288.2-201ENST00000446368 407 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AL513533.1-201ENST00000453728 415 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AC005008.1-201ENST00000456151 612 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 DEFB109F-201ENST00000491870 277 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 AC124293.1-201ENST00000530034 493 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC4P56524 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 AC090751.1-201ENST00000566966 267 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms