Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MTND4LP24-201ENST00000572277 291 ntBASIC4.15□□□□□ -1.75
CDH11P55287 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.15□□□□□ -1.75
CDH11P55287 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 VN1R74P-201ENST00000613259 503 ntBASIC4.15□□□□□ -1.75
CDH11P55287 MIR7154-201ENST00000620673 73 ntBASIC4.15□□□□□ -1.75
CDH11P55287 MIR7703-201ENST00000620784 77 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH11P55287 AC091905.2-201ENST00000623143 306 ntBASIC4.15□□□□□ -1.75
CDH11P55287 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 SEPT7P7-201ENST00000420492 1301 ntBASIC4.15□□□□□ -1.75
CDH11P55287 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH11P55287 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 AC099786.3-201ENST00000565735 1410 ntBASIC4.14□□□□□ -1.75
CDH11P55287 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDH11P55287 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 RNU4-68P-201ENST00000364314 141 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RNU4-28P-201ENST00000364739 141 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC019155.1-201ENST00000382242 574 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RNU1-44P-201ENST00000384453 163 ntBASIC4.14□□□□□ -1.75
CDH11P55287 MIR513B-201ENST00000385136 84 ntBASIC4.14□□□□□ -1.75
CDH11P55287 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
CDH11P55287 GLULP6-201ENST00000399502 913 ntBASIC4.14□□□□□ -1.75
CDH11P55287 FCF1P5-201ENST00000406490 482 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RN7SKP106-201ENST00000410832 272 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH11P55287 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 AL359265.2-201ENST00000434367 631 ntBASIC4.14□□□□□ -1.75
CDH11P55287 MTND1P26-201ENST00000440488 538 ntBASIC4.14□□□□□ -1.75
CDH11P55287 ELOCP10-201ENST00000440624 327 ntBASIC4.14□□□□□ -1.75
CDH11P55287 FHP1-201ENST00000442741 703 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RPL36AP15-201ENST00000444514 266 ntBASIC4.14□□□□□ -1.75
CDH11P55287 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 AC010326.1-201ENST00000462726 602 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RPL23AP71-201ENST00000470966 469 ntBASIC4.14□□□□□ -1.75
CDH11P55287 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 RPL12P20-201ENST00000475538 479 ntBASIC4.14□□□□□ -1.75
CDH11P55287 RN7SL481P-201ENST00000477764 299 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC090013.1-201ENST00000485147 480 ntBASIC4.14□□□□□ -1.75
CDH11P55287 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.14□□□□□ -1.75
CDH11P55287 SCARNA22-201ENST00000503991 125 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC111000.3-201ENST00000508057 576 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH11P55287 AC008694.2-201ENST00000517591 306 ntBASIC4.14□□□□□ -1.75
CDH11P55287 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH11P55287 LRRC34P1-201ENST00000542742 915 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 AC090751.1-201ENST00000566966 267 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH11P55287 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 CLIC4P2-201ENST00000601934 717 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC022022.2-201ENST00000602989 360 ntBASIC4.14□□□□□ -1.75
CDH11P55287 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.14□□□□□ -1.75
CDH11P55287 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.14□□□□□ -1.75
CDH11P55287 ELOCP34-201ENST00000604436 327 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC002487.1-201ENST00000604565 994 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC019193.2-201ENST00000610012 634 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC087683.2-201ENST00000611384 326 ntBASIC4.14□□□□□ -1.75
CDH11P55287 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 AC009159.2-201ENST00000617603 606 ntBASIC4.14□□□□□ -1.75
CDH11P55287 AC067931.1-201ENST00000624190 671 ntBASIC4.14□□□□□ -1.75
CDH11P55287 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH11P55287 MIR7641-1-201ENST00000627518 61 ntBASIC4.14□□□□□ -1.75
CDH11P55287 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH11P55287 AC017104.5-201ENST00000637647 639 ntBASIC4.14□□□□□ -1.75
CDH11P55287 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.14□□□□□ -1.75
CDH11P55287 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CDH11P55287 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH11P55287 MTND4P26-201ENST00000415971 1359 ntBASIC4.14□□□□□ -1.75
CDH11P55287 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH11P55287 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
CDH11P55287 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms