Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VCPP55072 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VCPP55072 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VCPP55072 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VCPP55072 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VCPP55072 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VCPP55072 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
VCPP55072 RN7SKP44-201ENST00000363602 316 ntBASIC4.48□□□□□ -1.69
VCPP55072 RNU6-244P-201ENST00000391028 104 ntBASIC4.48□□□□□ -1.69
VCPP55072 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 RNA5SP36-201ENST00000410197 133 ntBASIC4.48□□□□□ -1.69
VCPP55072 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.48□□□□□ -1.69
VCPP55072 RBMY1KP-201ENST00000423480 476 ntBASIC4.48□□□□□ -1.69
VCPP55072 AL606490.7-201ENST00000433136 191 ntBASIC4.48□□□□□ -1.69
VCPP55072 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.48□□□□□ -1.69
VCPP55072 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.48□□□□□ -1.69
VCPP55072 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.48□□□□□ -1.69
VCPP55072 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VCPP55072 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.48□□□□□ -1.69
VCPP55072 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.48□□□□□ -1.69
VCPP55072 AC089999.1-201ENST00000460336 374 ntBASIC4.48□□□□□ -1.69
VCPP55072 AC108145.1-201ENST00000503770 153 ntBASIC4.48□□□□□ -1.69
VCPP55072 AC108157.1-201ENST00000510511 539 ntBASIC4.48□□□□□ -1.69
VCPP55072 RNA5SP49-201ENST00000516450 115 ntBASIC4.48□□□□□ -1.69
VCPP55072 RNA5SP519-201ENST00000516480 119 ntBASIC4.48□□□□□ -1.69
VCPP55072 RNU6-1308P-201ENST00000516817 103 ntBASIC4.48□□□□□ -1.69
VCPP55072 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
VCPP55072 AC008083.2-201ENST00000546707 476 ntBASIC4.48□□□□□ -1.69
VCPP55072 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.48□□□□□ -1.69
VCPP55072 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VCPP55072 MIR3124-201ENST00000582636 67 ntBASIC4.48□□□□□ -1.69
VCPP55072 MIR4512-201ENST00000583257 77 ntBASIC4.48□□□□□ -1.69
VCPP55072 AC107982.3-201ENST00000584957 985 ntBASIC4.48□□□□□ -1.69
VCPP55072 AL133247.2-201ENST00000603236 482 ntBASIC4.48□□□□□ -1.69
VCPP55072 AL161729.3-201ENST00000603533 673 ntBASIC4.48□□□□□ -1.69
VCPP55072 AL139286.1-201ENST00000604465 483 ntBASIC4.48□□□□□ -1.69
VCPP55072 MIR432-201ENST00000606207 94 ntBASIC4.48□□□□□ -1.69
VCPP55072 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 AC006042.3-201ENST00000454684 1469 ntBASIC4.48□□□□□ -1.69
VCPP55072 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VCPP55072 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
VCPP55072 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.48□□□□□ -1.69
VCPP55072 AC011266.1-201ENST00000624119 3569 ntBASIC4.48□□□□□ -1.69
VCPP55072 AC134882.1-201ENST00000603738 1676 ntBASIC4.48□□□□□ -1.69
VCPP55072 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
VCPP55072 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VCPP55072 AC007529.1-201ENST00000418574 2178 ntBASIC4.47□□□□□ -1.69
VCPP55072 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 AL590704.1-201ENST00000402856 794 ntBASIC4.47□□□□□ -1.69
VCPP55072 RAB9AP3-201ENST00000412737 573 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 KRR1P1-201ENST00000419430 803 ntBASIC4.47□□□□□ -1.69
VCPP55072 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.47□□□□□ -1.69
VCPP55072 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VCPP55072 NDUFA5P10-201ENST00000432147 357 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 RAB9AP1-201ENST00000449393 573 ntBASIC4.47□□□□□ -1.69
VCPP55072 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
VCPP55072 RPL23AP12-201ENST00000467573 473 ntBASIC4.47□□□□□ -1.69
VCPP55072 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.47□□□□□ -1.69
VCPP55072 AC010683.1-201ENST00000473673 378 ntBASIC4.47□□□□□ -1.69
VCPP55072 GAPDHP36-201ENST00000480688 918 ntBASIC4.47□□□□□ -1.69
VCPP55072 RPS6P4-201ENST00000494693 758 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 AC016550.3-201ENST00000515706 767 ntBASIC4.47□□□□□ -1.69
VCPP55072 RNU6-889P-201ENST00000517189 103 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 AC135001.1-201ENST00000544546 283 ntBASIC4.47□□□□□ -1.69
VCPP55072 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.47□□□□□ -1.69
VCPP55072 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.47□□□□□ -1.69
VCPP55072 AC008638.3-201ENST00000603341 463 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC010680.3-201ENST00000604215 520 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC090912.3-201ENST00000609775 533 ntBASIC4.47□□□□□ -1.69
VCPP55072 AL021997.2-201ENST00000615674 271 ntBASIC4.47□□□□□ -1.69
VCPP55072 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.47□□□□□ -1.69
VCPP55072 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VCPP55072 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.47□□□□□ -1.69
VCPP55072 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VCPP55072 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
VCPP55072 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.46□□□□□ -1.69
VCPP55072 AL359715.4-201ENST00000606629 1436 ntBASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms