Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC106782.4-201ENST00000568264 210 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AL606834.2-201ENST00000602954 668 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC006363.1-201ENST00000603806 463 ntBASIC4.34□□□□□ -1.71
NUP98P52948 MIR486-1-201ENST00000612171 68 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC074276.2-201ENST00000619891 348 ntBASIC4.34□□□□□ -1.71
NUP98P52948 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NUP98P52948 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP98P52948 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP98P52948 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP98P52948 NPM1P38-201ENST00000403835 865 ntBASIC4.33□□□□□ -1.72
NUP98P52948 AL139039.2-201ENST00000407436 479 ntBASIC4.33□□□□□ -1.72
NUP98P52948 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP98P52948 ELOCP18-201ENST00000434209 337 ntBASIC4.33□□□□□ -1.72
NUP98P52948 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP98P52948 AC074367.1-201ENST00000438685 1125 ntBASIC4.33□□□□□ -1.72
NUP98P52948 NPM1P17-201ENST00000479221 602 ntBASIC4.33□□□□□ -1.72
NUP98P52948 FCF1P3-201ENST00000496394 590 ntBASIC4.33□□□□□ -1.72
NUP98P52948 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP98P52948 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP98P52948 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.33□□□□□ -1.72
NUP98P52948 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP98P52948 AL139395.1-201ENST00000603662 160 ntBASIC4.33□□□□□ -1.72
NUP98P52948 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.33□□□□□ -1.72
NUP98P52948 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NUP98P52948 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP98P52948 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
NUP98P52948 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NUP98P52948 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP98P52948 HSFY1P1-201ENST00000423928 1178 ntBASIC4.32□□□□□ -1.72
NUP98P52948 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP98P52948 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP98P52948 AL049873.1-201ENST00000480540 376 ntBASIC4.32□□□□□ -1.72
NUP98P52948 RPL7P38-201ENST00000488396 739 ntBASIC4.32□□□□□ -1.72
NUP98P52948 BTF3L4P4-201ENST00000506381 449 ntBASIC4.32□□□□□ -1.72
NUP98P52948 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP98P52948 HIGD1AP18-201ENST00000520730 278 ntBASIC4.32□□□□□ -1.72
NUP98P52948 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP98P52948 AL732372.2-225ENST00000642124 456 ntBASIC4.32□□□□□ -1.72
NUP98P52948 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP98P52948 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP98P52948 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 RPL6P21-201ENST00000418672 846 ntBASIC4.32□□□□□ -1.72
NUP98P52948 IFNNP1-201ENST00000429219 553 ntBASIC4.32□□□□□ -1.72
NUP98P52948 HSPE1P27-201ENST00000430808 296 ntBASIC4.32□□□□□ -1.72
NUP98P52948 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP98P52948 RPS29P2-201ENST00000479278 136 ntBASIC4.32□□□□□ -1.72
NUP98P52948 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP98P52948 AC005798.1-201ENST00000513715 387 ntBASIC4.32□□□□□ -1.72
NUP98P52948 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
NUP98P52948 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP98P52948 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP98P52948 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP98P52948 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.32□□□□□ -1.72
NUP98P52948 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
NUP98P52948 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
NUP98P52948 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP98P52948 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 RPL23AP57-201ENST00000332361 466 ntBASIC4.31□□□□□ -1.72
NUP98P52948 RNA5SP374-201ENST00000362939 125 ntBASIC4.31□□□□□ -1.72
NUP98P52948 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
NUP98P52948 AC063979.1-201ENST00000415539 377 ntBASIC4.31□□□□□ -1.72
NUP98P52948 NANOGP6-201ENST00000429190 847 ntBASIC4.31□□□□□ -1.72
NUP98P52948 AC104849.1-201ENST00000462623 405 ntBASIC4.31□□□□□ -1.72
NUP98P52948 RN7SL807P-201ENST00000470923 297 ntBASIC4.31□□□□□ -1.72
NUP98P52948 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP98P52948 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP98P52948 AL121766.1-201ENST00000547436 487 ntBASIC4.31□□□□□ -1.72
NUP98P52948 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 AC073657.2-201ENST00000605661 303 ntBASIC4.31□□□□□ -1.72
NUP98P52948 MIR7851-201ENST00000610611 160 ntBASIC4.31□□□□□ -1.72
NUP98P52948 AC135507.2-201ENST00000612443 309 ntBASIC4.31□□□□□ -1.72
NUP98P52948 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NUP98P52948 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 OTUD4P1-201ENST00000237841 3067 ntBASIC4.31□□□□□ -1.72
NUP98P52948 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP98P52948 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NUP98P52948 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP98P52948 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NUP98P52948 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP98P52948 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 MTND4P22-201ENST00000413116 1169 ntBASIC4.3□□□□□ -1.72
NUP98P52948 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 LIPT1P1-201ENST00000415870 1186 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP98P52948 RSL24D1P3-201ENST00000449255 495 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP98P52948 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP98P52948 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms