Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC108729.1-201ENST00000487812 947 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
PDX1P52945 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.28□□□□□ -1.72
PDX1P52945 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.28□□□□□ -1.72
PDX1P52945 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.28□□□□□ -1.72
PDX1P52945 AC139103.1-201ENST00000534696 1030 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.28□□□□□ -1.72
PDX1P52945 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.28□□□□□ -1.72
PDX1P52945 MTND1P8-201ENST00000571424 950 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AC115085.1-201ENST00000588924 229 ntBASIC4.28□□□□□ -1.72
PDX1P52945 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.28□□□□□ -1.72
PDX1P52945 AC124856.1-201ENST00000600819 896 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AL365400.2-201ENST00000605604 902 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AL157392.4-201ENST00000609756 345 ntBASIC4.28□□□□□ -1.72
PDX1P52945 DUXAP10-204ENST00000612052 616 ntBASIC4.28□□□□□ -1.72
PDX1P52945 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PDX1P52945 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.28□□□□□ -1.72
PDX1P52945 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDX1P52945 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
PDX1P52945 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
PDX1P52945 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 AC005261.4-201ENST00000600047 1385 ntBASIC4.27□□□□□ -1.73
PDX1P52945 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
PDX1P52945 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 MIR331-201ENST00000362302 94 ntBASIC4.27□□□□□ -1.73
PDX1P52945 SNORA48.7-201ENST00000391302 135 ntBASIC4.27□□□□□ -1.73
PDX1P52945 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 PPIAP13-201ENST00000434706 478 ntBASIC4.27□□□□□ -1.73
PDX1P52945 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.27□□□□□ -1.73
PDX1P52945 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.27□□□□□ -1.73
PDX1P52945 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PDX1P52945 AC104108.1-201ENST00000509930 412 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC119751.1-201ENST00000513357 765 ntBASIC4.27□□□□□ -1.73
PDX1P52945 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.27□□□□□ -1.73
PDX1P52945 HMGB1P1-201ENST00000522557 636 ntBASIC4.27□□□□□ -1.73
PDX1P52945 NDUFS5P6-201ENST00000529136 295 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.27□□□□□ -1.73
PDX1P52945 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.27□□□□□ -1.73
PDX1P52945 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.27□□□□□ -1.73
PDX1P52945 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.27□□□□□ -1.73
PDX1P52945 AC090515.3-201ENST00000560431 315 ntBASIC4.27□□□□□ -1.73
PDX1P52945 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 EIF1P6-201ENST00000600054 334 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC096553.1-201ENST00000605169 829 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC243654.2-201ENST00000612843 443 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 AL078595.3-201ENST00000623815 1166 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.27□□□□□ -1.73
PDX1P52945 AL596275.2-204ENST00000641628 552 ntBASIC4.27□□□□□ -1.73
PDX1P52945 AL596275.2-206ENST00000641957 626 ntBASIC4.27□□□□□ -1.73
PDX1P52945 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
PDX1P52945 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDX1P52945 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDX1P52945 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
PDX1P52945 MTND4P31-201ENST00000425607 1343 ntBASIC4.26□□□□□ -1.73
PDX1P52945 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.26□□□□□ -1.73
PDX1P52945 NSRP1P1-201ENST00000444067 1693 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC010329.2-201ENST00000595195 2737 ntBASIC4.26□□□□□ -1.73
PDX1P52945 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PDX1P52945 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDX1P52945 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDX1P52945 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDX1P52945 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDX1P52945 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AL590290.1-201ENST00000405336 380 ntBASIC4.26□□□□□ -1.73
PDX1P52945 SNORA11C-201ENST00000408532 129 ntBASIC4.26□□□□□ -1.73
PDX1P52945 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 BTF3P8-201ENST00000414577 526 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 C1DP1-201ENST00000426049 402 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC092634.2-201ENST00000428146 1010 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC073069.1-201ENST00000428657 441 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.26□□□□□ -1.73
PDX1P52945 RPL23AP52-201ENST00000439311 478 ntBASIC4.26□□□□□ -1.73
PDX1P52945 PTGES3P1-201ENST00000439531 483 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.26□□□□□ -1.73
PDX1P52945 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 RPL6P9-201ENST00000466502 859 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC023050.1-201ENST00000498198 304 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC091860.1-201ENST00000505723 432 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 AC008837.1-201ENST00000511513 412 ntBASIC4.26□□□□□ -1.73
PDX1P52945 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.26□□□□□ -1.73
PDX1P52945 RNA5SP446-201ENST00000515955 82 ntBASIC4.26□□□□□ -1.73
PDX1P52945 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms