Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 TIMM9P1-201ENST00000436122 256 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 SUMO2P3-201ENST00000438311 288 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC020550.1-201ENST00000447385 163 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 RPL23AP28-201ENST00000448062 470 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC116562.3-201ENST00000506136 177 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 Y_RNA.721-201ENST00000517207 102 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 AC068587.5-201ENST00000528506 175 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 OR52K3P-201ENST00000531655 943 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.29□□□□□ -1.4
RNF144AP50876 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 AL591767.3-201ENST00000554632 525 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 MIR4703-201ENST00000577728 79 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC023206.1-201ENST00000605824 298 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 PISRT1.1-201ENST00000616930 107 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 uc_338.9-201ENST00000617424 182 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AC131009.3-201ENST00000621809 287 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 AC005858.3-201ENST00000624756 589 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 AC243725.1-201ENST00000637164 436 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF144AP50876 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF144AP50876 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RNF144AP50876 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 RNA5SP65-201ENST00000363166 119 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 Y_RNA.645-201ENST00000391229 102 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 AC016769.3-201ENST00000396562 315 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.28□□□□□ -1.4
RNF144AP50876 RN7SKP117-201ENST00000410175 264 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 RNA5SP231-201ENST00000410496 138 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL133384.1-201ENST00000412744 351 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC009965.2-201ENST00000425328 970 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 ARL5AP4-201ENST00000430731 512 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL590128.1-201ENST00000433407 286 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AC003989.1-201ENST00000434569 565 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF144AP50876 AC005297.2-201ENST00000450430 606 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 SRP68P2-201ENST00000456184 254 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC092324.1-201ENST00000468671 324 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 RPL12P20-201ENST00000475538 479 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 RPL21P42-201ENST00000488408 464 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 RPL23AP80-201ENST00000495605 424 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 OR8R1P-201ENST00000543943 764 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF144AP50876 RN7SL657P-201ENST00000582431 293 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 AC023043.2-201ENST00000589678 1026 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL591167.1-201ENST00000607321 456 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AL445647.2-201ENST00000615170 130 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AC244100.1-202ENST00000621554 382 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF144AP50876 AL732372.2-225ENST00000642124 456 ntBASIC6.28□□□□□ -1.4
RNF144AP50876 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RNF144AP50876 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RNF144AP50876 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms