Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CR1P49238 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.57□□□□□ -1.84
CX3CR1P49238 GNRHR2P1-201ENST00000555315 631 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AC141257.3-201ENST00000572906 215 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 MIR4277-201ENST00000578298 84 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 MIR5684-201ENST00000585074 65 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AC015911.5-201ENST00000587076 451 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CR1P49238 LLPHP1-201ENST00000603571 367 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AP000255.1-201ENST00000610276 676 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AC105429.2-201ENST00000610567 517 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CR1P49238 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CX3CR1P49238 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AL138878.1-201ENST00000405131 347 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 RNU2-65P-201ENST00000410162 185 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 XKRYP4-201ENST00000414395 483 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 RPL23AP38-201ENST00000423801 469 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC023141.6-201ENST00000429418 337 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 MTCO1P54-201ENST00000430139 712 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC011742.1-201ENST00000431448 434 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 XKRYP5-201ENST00000449659 483 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 CYCSP42-201ENST00000450823 238 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 RPL21P103-201ENST00000479921 488 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 RN7SL459P-201ENST00000481078 302 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.56□□□□□ -1.84
CX3CR1P49238 Vault.1-201ENST00000516474 102 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 NARSP2-201ENST00000518524 679 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.56□□□□□ -1.84
CX3CR1P49238 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC025627.2-201ENST00000576220 160 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.56□□□□□ -1.84
CX3CR1P49238 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 IPO5P1-202ENST00000600039 287 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC068790.4-201ENST00000602474 263 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC114878.2-201ENST00000604863 1251 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC015849.2-201ENST00000605738 409 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AC114781.5-201ENST00000615297 108 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 AC011944.2-201ENST00000624440 683 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 CDRT1-208ENST00000630868 794 ntBASIC3.56□□□□□ -1.84
CX3CR1P49238 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.56□□□□□ -1.84
CX3CR1P49238 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CX3CR1P49238 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CX3CR1P49238 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.55□□□□□ -1.84
CX3CR1P49238 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 LARP1BP1-201ENST00000506036 1359 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 XIAPP3-201ENST00000312918 795 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 SNORA60-201ENST00000362396 134 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 SNORD115-48-201ENST00000364764 76 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 MIR1251-201ENST00000408552 70 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RPL37P18-201ENST00000411602 243 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AL358472.1-201ENST00000431295 329 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RPS4XP4-201ENST00000443195 763 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CR1P49238 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CR1P49238 SNRPGP5-201ENST00000456003 220 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RPS20P21-201ENST00000466859 343 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 UQCRHP4-201ENST00000471686 272 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RN7SL481P-201ENST00000477764 299 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 RN7SL604P-201ENST00000492589 296 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RPL31P61-201ENST00000496160 376 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms