Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP000859.1-201ENST00000525536 307 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC004217.3-201ENST00000551552 878 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A4P31645 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A4P31645 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC009117.1-201ENST00000563948 554 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 AGGF1P4-201ENST00000568249 801 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AP005262.1-201ENST00000582646 997 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 MIR7844-201ENST00000616161 122 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 AC091953.3-201ENST00000623220 236 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 MKKS-204ENST00000639674 192 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A4P31645 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A4P31645 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC6A4P31645 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A4P31645 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC6A4P31645 SCARNA15-201ENST00000607520 4325 ntBASIC5.14□□□□□ -1.59
SLC6A4P31645 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 MAPK10-338ENST00000641647 3362 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AL512646.1-201ENST00000269395 1077 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AL133264.1-201ENST00000407157 562 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 RPL23AP47-201ENST00000408017 460 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 RNU2-6P-201ENST00000411404 190 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC004022.2-201ENST00000413824 193 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AL513175.1-201ENST00000431492 780 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC008072.1-201ENST00000434254 824 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC092641.1-201ENST00000440229 772 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 OR52J1P-201ENST00000450596 932 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 RPL7AP52-201ENST00000458096 790 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 RNU6-956P-201ENST00000458868 103 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 RPS17P2-201ENST00000461663 408 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 RPS29P22-201ENST00000472363 168 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC083982.1-201ENST00000485679 344 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AL024509.2-201ENST00000493462 493 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC093281.2-201ENST00000510153 597 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC008494.2-201ENST00000514544 370 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 HIGD1AP6-201ENST00000521833 279 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AP001207.1-201ENST00000524051 481 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A4P31645 ZNF415P1-201ENST00000582279 1166 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 MIR4480-201ENST00000582492 71 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC092354.1-201ENST00000606057 376 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AP005432.1-201ENST00000580891 3485 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC107982.1-201ENST00000507171 1300 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC008079.2-201ENST00000623543 20396 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 AC097461.1-201ENST00000568928 2821 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 AC092104.1-201ENST00000497346 1441 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SLC6A4P31645 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC6A4P31645 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC6A4P31645 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 CDR1-202ENST00000625883 1485 ntBASIC5.13□□□□□ -1.59
SLC6A4P31645 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC6A4P31645 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC6A4P31645 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
SLC6A4P31645 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms