Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.79□□□□□ -1.48
CNGA1P29973 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.79□□□□□ -1.48
CNGA1P29973 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.79□□□□□ -1.48
CNGA1P29973 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.79□□□□□ -1.48
CNGA1P29973 NMNAT1P1-201ENST00000554095 876 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.79□□□□□ -1.48
CNGA1P29973 AC090616.2-202ENST00000584248 222 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AC112220.3-201ENST00000605502 502 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AC091946.2-201ENST00000606105 291 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.79□□□□□ -1.48
CNGA1P29973 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AC083809.1-201ENST00000615051 472 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 MIR6780A-201ENST00000615089 68 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.79□□□□□ -1.48
CNGA1P29973 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNGA1P29973 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.79□□□□□ -1.48
CNGA1P29973 AC104260.2-201ENST00000623551 3497 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNGA1P29973 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.79□□□□□ -1.48
CNGA1P29973 AL451142.2-201ENST00000429076 2090 ntBASIC5.79□□□□□ -1.48
CNGA1P29973 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNGA1P29973 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.79□□□□□ -1.48
CNGA1P29973 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNGA1P29973 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CNGA1P29973 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNGA1P29973 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 A2MP1-204ENST00000566278 4130 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 RNA5SP191-201ENST00000362585 102 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 RNU6-1200P-201ENST00000384162 107 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 SKINT1L-201ENST00000401057 817 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 QRSL1P2-201ENST00000418582 964 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 RPL12P34-201ENST00000424532 479 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.78□□□□□ -1.48
CNGA1P29973 AL161722.2-201ENST00000434731 981 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 RPS25P9-201ENST00000435591 252 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.78□□□□□ -1.48
CNGA1P29973 PPIAP21-201ENST00000464473 501 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 RPL7P38-201ENST00000488396 739 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC022133.1-201ENST00000490961 571 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CNGA1P29973 KLRA1P-201ENST00000503499 986 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 RNU6-232P-201ENST00000517144 64 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.78□□□□□ -1.48
CNGA1P29973 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AP000790.1-201ENST00000528891 737 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.78□□□□□ -1.48
CNGA1P29973 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.78□□□□□ -1.48
CNGA1P29973 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.78□□□□□ -1.48
CNGA1P29973 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.78□□□□□ -1.48
CNGA1P29973 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.78□□□□□ -1.48
CNGA1P29973 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.78□□□□□ -1.48
CNGA1P29973 PIGPP4-201ENST00000584447 307 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC004223.2-201ENST00000590309 544 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC006272.2-201ENST00000594725 163 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC010620.1-201ENST00000601088 1102 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC006539.2-201ENST00000601729 572 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 AC015908.5-201ENST00000623289 343 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 AC120349.2-201ENST00000625002 298 ntBASIC5.78□□□□□ -1.48
CNGA1P29973 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.78□□□□□ -1.48
CNGA1P29973 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNGA1P29973 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.78□□□□□ -1.48
CNGA1P29973 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CNGA1P29973 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.77□□□□□ -1.48
CNGA1P29973 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.77□□□□□ -1.49
CNGA1P29973 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
CNGA1P29973 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 Y_RNA.25-201ENST00000362528 102 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 RNA5SP391-201ENST00000363456 119 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 RNU6-1293P-201ENST00000384077 107 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 MIR506-201ENST00000384998 124 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 DSTNP4-201ENST00000399472 474 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.77□□□□□ -1.49
CNGA1P29973 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.77□□□□□ -1.49
CNGA1P29973 AL022400.1-201ENST00000423946 935 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNGA1P29973 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.77□□□□□ -1.49
CNGA1P29973 TCEA1P3-201ENST00000443005 880 ntBASIC5.77□□□□□ -1.49
CNGA1P29973 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms