Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL356321.1-201ENST00000621360 228 ntBASIC5□□□□□ -1.61
CD40P25942 AL691477.1-201ENST00000624398 162 ntBASIC5□□□□□ -1.61
CD40P25942 AL049767.1-202ENST00000637826 242 ntBASIC5□□□□□ -1.61
CD40P25942 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5□□□□□ -1.61
CD40P25942 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 AP004607.3-201ENST00000530354 3915 ntBASIC5□□□□□ -1.61
CD40P25942 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CD40P25942 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CD40P25942 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD40P25942 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 MFSD8-239ENST00000641590 2479 ntBASIC4.99□□□□□ -1.61
CD40P25942 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 MTCO1P11-201ENST00000429111 1528 ntBASIC4.99□□□□□ -1.61
CD40P25942 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 GNG5P1-201ENST00000255500 204 ntBASIC4.99□□□□□ -1.61
CD40P25942 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD40P25942 SNORA64.1-201ENST00000362600 132 ntBASIC4.99□□□□□ -1.61
CD40P25942 Y_RNA.46-201ENST00000362695 102 ntBASIC4.99□□□□□ -1.61
CD40P25942 SNORA51.1-201ENST00000363243 140 ntBASIC4.99□□□□□ -1.61
CD40P25942 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD40P25942 MIR143-201ENST00000385300 106 ntBASIC4.99□□□□□ -1.61
CD40P25942 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.99□□□□□ -1.61
CD40P25942 BMS1P17-202ENST00000416720 316 ntBASIC4.99□□□□□ -1.61
CD40P25942 RPL36AP36-201ENST00000418616 301 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC079355.1-201ENST00000421770 223 ntBASIC4.99□□□□□ -1.61
CD40P25942 AL121776.1-201ENST00000429337 372 ntBASIC4.99□□□□□ -1.61
CD40P25942 ARPC3P1-201ENST00000437218 533 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC096775.1-201ENST00000437724 448 ntBASIC4.99□□□□□ -1.61
CD40P25942 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 AC005297.1-201ENST00000444765 862 ntBASIC4.99□□□□□ -1.61
CD40P25942 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
CD40P25942 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 EIF4A1P11-201ENST00000451239 222 ntBASIC4.99□□□□□ -1.61
CD40P25942 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 RN7SL570P-201ENST00000484405 292 ntBASIC4.99□□□□□ -1.61
CD40P25942 RPL32P33-201ENST00000487023 394 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC034222.1-201ENST00000494052 532 ntBASIC4.99□□□□□ -1.61
CD40P25942 MYL12BP2-201ENST00000503948 512 ntBASIC4.99□□□□□ -1.61
CD40P25942 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 AC074255.1-201ENST00000511259 501 ntBASIC4.99□□□□□ -1.61
CD40P25942 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.99□□□□□ -1.61
CD40P25942 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 AC139365.2-201ENST00000517972 253 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.99□□□□□ -1.61
CD40P25942 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.99□□□□□ -1.61
CD40P25942 AC024224.1-201ENST00000538284 609 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 AC053481.3-201ENST00000577881 843 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.99□□□□□ -1.61
CD40P25942 ELOCP28-201ENST00000590044 317 ntBASIC4.99□□□□□ -1.61
CD40P25942 CKS1BP3-201ENST00000600888 237 ntBASIC4.99□□□□□ -1.61
CD40P25942 FO393422.1-201ENST00000603908 708 ntBASIC4.99□□□□□ -1.61
CD40P25942 AP001596.2-201ENST00000608410 312 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC092954.2-201ENST00000609103 430 ntBASIC4.99□□□□□ -1.61
CD40P25942 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.99□□□□□ -1.61
CD40P25942 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
CD40P25942 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD40P25942 AC068769.1-201ENST00000474767 2426 ntBASIC4.99□□□□□ -1.61
CD40P25942 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
CD40P25942 AC005725.1-201ENST00000577346 2607 ntBASIC4.99□□□□□ -1.61
CD40P25942 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.99□□□□□ -1.61
CD40P25942 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CD40P25942 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD40P25942 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms