Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.53□□□□□ -1.84
USF1P22415 AP004607.9-201ENST00000618202 316 ntBASIC3.53□□□□□ -1.84
USF1P22415 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.53□□□□□ -1.84
USF1P22415 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
USF1P22415 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
USF1P22415 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
USF1P22415 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 AC016588.2-201ENST00000632484 3021 ntBASIC3.52□□□□□ -1.85
USF1P22415 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 AC092162.3-201ENST00000624511 1624 ntBASIC3.52□□□□□ -1.85
USF1P22415 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
USF1P22415 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 MIR670-201ENST00000390142 98 ntBASIC3.52□□□□□ -1.85
USF1P22415 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.52□□□□□ -1.85
USF1P22415 PTMAP2-201ENST00000397627 327 ntBASIC3.52□□□□□ -1.85
USF1P22415 RN7SKP177-201ENST00000410567 355 ntBASIC3.52□□□□□ -1.85
USF1P22415 MIR1911-201ENST00000410783 80 ntBASIC3.52□□□□□ -1.85
USF1P22415 CYCSP19-201ENST00000411715 316 ntBASIC3.52□□□□□ -1.85
USF1P22415 OR8G2P-201ENST00000412796 908 ntBASIC3.52□□□□□ -1.85
USF1P22415 RANP4-201ENST00000413361 655 ntBASIC3.52□□□□□ -1.85
USF1P22415 RPL7P53-201ENST00000421245 739 ntBASIC3.52□□□□□ -1.85
USF1P22415 AL391219.1-201ENST00000422570 483 ntBASIC3.52□□□□□ -1.85
USF1P22415 OR8F1P-201ENST00000425243 930 ntBASIC3.52□□□□□ -1.85
USF1P22415 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 AL451062.2-201ENST00000427515 271 ntBASIC3.52□□□□□ -1.85
USF1P22415 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 HLA-N-201ENST00000437516 135 ntBASIC3.52□□□□□ -1.85
USF1P22415 VN1R34P-201ENST00000447387 883 ntBASIC3.52□□□□□ -1.85
USF1P22415 ABCF2P2-201ENST00000450549 296 ntBASIC3.52□□□□□ -1.85
USF1P22415 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 AC034236.1-201ENST00000469891 373 ntBASIC3.52□□□□□ -1.85
USF1P22415 HPRT1P2-201ENST00000505250 544 ntBASIC3.52□□□□□ -1.85
USF1P22415 NPM1P41-201ENST00000512920 831 ntBASIC3.52□□□□□ -1.85
USF1P22415 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 OR5M7P-201ENST00000526140 972 ntBASIC3.52□□□□□ -1.85
USF1P22415 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 CYP4A43P-201ENST00000568156 121 ntBASIC3.52□□□□□ -1.85
USF1P22415 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 VN1R79P-201ENST00000593540 513 ntBASIC3.52□□□□□ -1.85
USF1P22415 AL606490.9-201ENST00000603331 271 ntBASIC3.52□□□□□ -1.85
USF1P22415 AC005034.4-201ENST00000603612 899 ntBASIC3.52□□□□□ -1.85
USF1P22415 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.52□□□□□ -1.85
USF1P22415 AC090912.3-201ENST00000609775 533 ntBASIC3.52□□□□□ -1.85
USF1P22415 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
USF1P22415 AC019278.1-201ENST00000623516 479 ntBASIC3.52□□□□□ -1.85
USF1P22415 OR8B1P-202ENST00000641132 1178 ntBASIC3.52□□□□□ -1.85
USF1P22415 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.52□□□□□ -1.85
USF1P22415 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 SAGE2P-201ENST00000420011 2126 ntBASIC3.52□□□□□ -1.85
USF1P22415 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.52□□□□□ -1.85
USF1P22415 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USF1P22415 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
USF1P22415 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 AC008725.1-201ENST00000605123 2263 ntBASIC3.51□□□□□ -1.85
USF1P22415 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 MARK2P15-201ENST00000432204 2186 ntBASIC3.51□□□□□ -1.85
USF1P22415 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USF1P22415 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
USF1P22415 SNORA27.3-201ENST00000364937 134 ntBASIC3.51□□□□□ -1.85
USF1P22415 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.51□□□□□ -1.85
USF1P22415 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 RNU11-4P-201ENST00000391149 133 ntBASIC3.51□□□□□ -1.85
USF1P22415 AL589655.1-201ENST00000405398 482 ntBASIC3.51□□□□□ -1.85
USF1P22415 RNU6ATAC-201ENST00000408749 126 ntBASIC3.51□□□□□ -1.85
USF1P22415 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.51□□□□□ -1.85
USF1P22415 LINC01881-201ENST00000416103 412 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 BX119904.1-201ENST00000432026 348 ntBASIC3.51□□□□□ -1.85
USF1P22415 AC007389.2-201ENST00000434630 306 ntBASIC3.51□□□□□ -1.85
USF1P22415 RPS29P7-201ENST00000439662 171 ntBASIC3.51□□□□□ -1.85
USF1P22415 FABP3P2-201ENST00000453169 399 ntBASIC3.51□□□□□ -1.85
USF1P22415 RPL21P71-201ENST00000465598 459 ntBASIC3.51□□□□□ -1.85
USF1P22415 RPS29P19-201ENST00000479709 171 ntBASIC3.51□□□□□ -1.85
USF1P22415 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.51□□□□□ -1.85
USF1P22415 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.51□□□□□ -1.85
USF1P22415 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USF1P22415 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.51□□□□□ -1.85
USF1P22415 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.51□□□□□ -1.85
USF1P22415 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms