Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC096586.1-201ENST00000610267 561 ntBASIC4.35□□□□□ -1.71
CDH3P22223 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH3P22223 AC243654.2-201ENST00000612843 443 ntBASIC4.35□□□□□ -1.71
CDH3P22223 MIR7973-1-201ENST00000614683 76 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC084824.4-201ENST00000620106 731 ntBASIC4.35□□□□□ -1.71
CDH3P22223 MIR6758-201ENST00000620653 63 ntBASIC4.35□□□□□ -1.71
CDH3P22223 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AP003072.4-201ENST00000624580 310 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC006065.6-201ENST00000625201 545 ntBASIC4.35□□□□□ -1.71
CDH3P22223 OR4G3P-201ENST00000633500 913 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC099654.9-201ENST00000637055 678 ntBASIC4.35□□□□□ -1.71
CDH3P22223 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH3P22223 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH3P22223 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH3P22223 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH3P22223 ZNF849P-201ENST00000594711 1566 ntBASIC4.35□□□□□ -1.71
CDH3P22223 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CDH3P22223 AC025125.1-201ENST00000624743 1922 ntBASIC4.34□□□□□ -1.71
CDH3P22223 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDH3P22223 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 OR56B2P-201ENST00000317102 954 ntBASIC4.34□□□□□ -1.71
CDH3P22223 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH3P22223 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
CDH3P22223 SNORA62-201ENST00000365493 153 ntBASIC4.34□□□□□ -1.71
CDH3P22223 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CDH3P22223 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 FCF1P5-201ENST00000406490 482 ntBASIC4.34□□□□□ -1.71
CDH3P22223 RN7SKP177-201ENST00000410567 355 ntBASIC4.34□□□□□ -1.71
CDH3P22223 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH3P22223 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 AC073143.1-201ENST00000436316 395 ntBASIC4.34□□□□□ -1.71
CDH3P22223 HSFY3P-201ENST00000444242 1191 ntBASIC4.34□□□□□ -1.71
CDH3P22223 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 TPT1P12-201ENST00000448968 492 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 AC012158.1-204ENST00000483430 465 ntBASIC4.34□□□□□ -1.71
CDH3P22223 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH3P22223 AC008427.1-201ENST00000503102 655 ntBASIC4.34□□□□□ -1.71
CDH3P22223 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH3P22223 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH3P22223 AC015912.2-201ENST00000571053 181 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH3P22223 AC025946.2-201ENST00000603398 234 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AP002802.2-201ENST00000605877 235 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AC090948.1-201ENST00000607464 549 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AL121652.1-201ENST00000608851 448 ntBASIC4.34□□□□□ -1.71
CDH3P22223 RNU6-1192P-201ENST00000612197 107 ntBASIC4.34□□□□□ -1.71
CDH3P22223 AC078899.5-201ENST00000612475 178 ntBASIC4.34□□□□□ -1.71
CDH3P22223 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH3P22223 RNU6-489P-201ENST00000618289 107 ntBASIC4.34□□□□□ -1.71
CDH3P22223 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDH3P22223 U6.107-201ENST00000637108 79 ntBASIC4.34□□□□□ -1.71
CDH3P22223 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH3P22223 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH3P22223 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDH3P22223 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 U3.15-201ENST00000365398 212 ntBASIC4.33□□□□□ -1.72
CDH3P22223 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH3P22223 SNORD65C-201ENST00000390962 71 ntBASIC4.33□□□□□ -1.72
CDH3P22223 RNU6-932P-201ENST00000391108 106 ntBASIC4.33□□□□□ -1.72
CDH3P22223 RPL23AP59-201ENST00000399415 461 ntBASIC4.33□□□□□ -1.72
CDH3P22223 RAB28P1-201ENST00000411517 641 ntBASIC4.33□□□□□ -1.72
CDH3P22223 P2RY10P2-201ENST00000416730 913 ntBASIC4.33□□□□□ -1.72
CDH3P22223 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AL391219.1-201ENST00000422570 483 ntBASIC4.33□□□□□ -1.72
CDH3P22223 PTP4A1P7-201ENST00000423476 514 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AL732292.1-201ENST00000426692 226 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AC012671.1-201ENST00000451912 203 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AL035407.2-201ENST00000454090 378 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC008280.2-201ENST00000455473 307 ntBASIC4.33□□□□□ -1.72
CDH3P22223 RPL23AP24-201ENST00000458203 385 ntBASIC4.33□□□□□ -1.72
CDH3P22223 RPS27AP17-201ENST00000463344 455 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms