Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 LINC02471-203ENST00000641941 4752 ntBASIC3.83□□□□□ -1.8
SDC1P18827 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 SNORD56.4-201ENST00000363883 71 ntBASIC3.83□□□□□ -1.8
SDC1P18827 MIR1251-201ENST00000408552 70 ntBASIC3.83□□□□□ -1.8
SDC1P18827 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 HSPE1P12-201ENST00000412576 301 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 AL391219.1-201ENST00000422570 483 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC009480.2-201ENST00000422916 432 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC009965.2-201ENST00000425328 970 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 TPTE2P6-202ENST00000445572 1007 ntBASIC3.83□□□□□ -1.8
SDC1P18827 MOB1AP2-201ENST00000446060 614 ntBASIC3.83□□□□□ -1.8
SDC1P18827 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 RPL32P14-201ENST00000463196 378 ntBASIC3.83□□□□□ -1.8
SDC1P18827 SETP6-201ENST00000479329 568 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC069499.1-201ENST00000489433 509 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.83□□□□□ -1.8
SDC1P18827 OR5H3P-201ENST00000502817 919 ntBASIC3.83□□□□□ -1.8
SDC1P18827 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 IGKV2-36-201ENST00000519999 223 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.83□□□□□ -1.8
SDC1P18827 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 ELOCP28-201ENST00000590044 317 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC006116.5-201ENST00000591936 559 ntBASIC3.83□□□□□ -1.8
SDC1P18827 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC1P18827 AC026741.1-201ENST00000605892 482 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC245100.7-201ENST00000609678 442 ntBASIC3.83□□□□□ -1.8
SDC1P18827 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 MIR8059-201ENST00000620427 81 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC124312.6-202ENST00000623624 418 ntBASIC3.83□□□□□ -1.8
SDC1P18827 AC020978.9-201ENST00000624380 1141 ntBASIC3.83□□□□□ -1.8
SDC1P18827 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.83□□□□□ -1.8
SDC1P18827 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 MTCO1P18-201ENST00000455518 1419 ntBASIC3.83□□□□□ -1.8
SDC1P18827 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 AC009229.4-201ENST00000623854 1947 ntBASIC3.83□□□□□ -1.8
SDC1P18827 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC1P18827 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDC1P18827 IPO8P1-201ENST00000455509 3109 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDC1P18827 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDC1P18827 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.82□□□□□ -1.8
SDC1P18827 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDC1P18827 OR11H4-201ENST00000315409 1082 ntBASIC3.82□□□□□ -1.8
SDC1P18827 RNU6-543P-201ENST00000362576 108 ntBASIC3.82□□□□□ -1.8
SDC1P18827 MIR585-201ENST00000384887 94 ntBASIC3.82□□□□□ -1.8
SDC1P18827 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SDC1P18827 HMGB3P19-201ENST00000403971 560 ntBASIC3.82□□□□□ -1.8
SDC1P18827 MIR1303-201ENST00000408625 86 ntBASIC3.82□□□□□ -1.8
SDC1P18827 RN7SKP33-201ENST00000410942 340 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.82□□□□□ -1.8
SDC1P18827 BX664727.1-201ENST00000416024 466 ntBASIC3.82□□□□□ -1.8
SDC1P18827 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
SDC1P18827 AL512637.2-201ENST00000431287 1256 ntBASIC3.82□□□□□ -1.8
SDC1P18827 MTCO1P43-201ENST00000431831 488 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDC1P18827 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 AL356535.1-201ENST00000440335 398 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 YWHAQP9-201ENST00000445891 512 ntBASIC3.82□□□□□ -1.8
SDC1P18827 TPMTP4-201ENST00000450749 678 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AL162388.1-201ENST00000450912 352 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC006511.1-201ENST00000470614 315 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC015908.1-201ENST00000478739 476 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC083829.1-201ENST00000503756 657 ntBASIC3.82□□□□□ -1.8
SDC1P18827 IGBP1P5-201ENST00000507524 1000 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC112518.2-201ENST00000508565 425 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 AC010285.3-201ENST00000511668 676 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC092451.2-201ENST00000538746 658 ntBASIC3.82□□□□□ -1.8
SDC1P18827 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.82□□□□□ -1.8
SDC1P18827 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SDC1P18827 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.82□□□□□ -1.8
SDC1P18827 MTND4LP24-201ENST00000572277 291 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms