| MUC1 | P15941 | LINC00648-202 | ENST00000555985 | 2885 nt | TSL 2 BASIC | 3.4 | □□□□□ -1.86 | | |
| MUC1 | P15941 | JCHAIN-201 | ENST00000254801 | 1438 nt | APPRIS P1 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL121657.1-201 | ENST00000327215 | 531 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | VIP-201 | ENST00000367243 | 1581 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | ZNRF3-IT1-201 | ENST00000412798 | 674 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC079630.1-201 | ENST00000412812 | 585 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | TPT1P2-201 | ENST00000413105 | 503 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC01934-202 | ENST00000424170 | 686 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | OR5BE1P-201 | ENST00000425977 | 939 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC099060.1-201 | ENST00000427806 | 448 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | ARF4P2-201 | ENST00000430209 | 526 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL121718.1-201 | ENST00000449463 | 387 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RPL7AP52-201 | ENST00000458096 | 790 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RPL23AP62-201 | ENST00000463396 | 453 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC010255.1-201 | ENST00000504829 | 731 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC011131.1-201 | ENST00000521224 | 252 nt | TSL 2 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC008415.1-201 | ENST00000522189 | 734 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC023442.3-203 | ENST00000530946 | 533 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC068389.4-201 | ENST00000531379 | 689 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AP006295.1-201 | ENST00000532605 | 585 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC005906.2-204 | ENST00000541095 | 481 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC02404-201 | ENST00000546710 | 1188 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC091516.1-201 | ENST00000549191 | 703 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC127502.1-204 | ENST00000564861 | 618 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC092326.1-201 | ENST00000567465 | 674 nt | TSL 3 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC007599.1-201 | ENST00000568688 | 1174 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC010528.1-201 | ENST00000568714 | 739 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC020910.2-201 | ENST00000603635 | 610 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL049844.2-201 | ENST00000604280 | 628 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC012467.1-201 | ENST00000607740 | 256 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL354696.1-201 | ENST00000614652 | 497 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC105105.5-201 | ENST00000622635 | 1294 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | PCBP1-AS1-307 | ENST00000627050 | 912 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | OR5BE1P-202 | ENST00000641168 | 1176 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC119674.1-220 | ENST00000641502 | 1048 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL391684.1-201 | ENST00000416191 | 2998 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | SLC6A15-203 | ENST00000450363 | 4229 nt | TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | PRKD3-202 | ENST00000379066 | 6111 nt | APPRIS P1 TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | DOCK7-218 | ENST00000635123 | 6297 nt | APPRIS ALT2 TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | DNAJC10-201 | ENST00000264065 | 20129 nt | APPRIS P1 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| MUC1 | P15941 | BCLAF1-213 | ENST00000530767 | 4186 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | ZNF826P-207 | ENST00000622273 | 1910 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | VEPH1-203 | ENST00000392833 | 3979 nt | TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL589826.1-201 | ENST00000340697 | 249 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | C1orf100-202 | ENST00000366537 | 483 nt | TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RNU6-1263P-201 | ENST00000384601 | 106 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | DSCR8-202 | ENST00000400477 | 534 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | HMGB3P19-201 | ENST00000403971 | 560 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | GTDC1-206 | ENST00000409214 | 2954 nt | APPRIS P1 TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL031674.1-202 | ENST00000413070 | 465 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | MTATP6P19-201 | ENST00000413797 | 659 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL512504.1-201 | ENST00000415494 | 778 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL356095.1-201 | ENST00000417217 | 199 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RSL24D1P6-201 | ENST00000426934 | 401 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | MRPS33P4-201 | ENST00000434892 | 317 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | ARHGEF7-AS1-201 | ENST00000435037 | 321 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | MIR99AHG-205 | ENST00000435697 | 716 nt | TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC01376-204 | ENST00000449124 | 626 nt | TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RPL7P31-201 | ENST00000450192 | 724 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC005304.1-201 | ENST00000457609 | 405 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RN7SL860P-201 | ENST00000473738 | 223 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC00613-201 | ENST00000504365 | 467 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | KRT19P6-201 | ENST00000510983 | 209 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC02014-201 | ENST00000514010 | 713 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | MTCO1P35-201 | ENST00000515270 | 228 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RAD21-203 | ENST00000517749 | 1003 nt | TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC008802.1-201 | ENST00000519121 | 791 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | OR7E10P-201 | ENST00000526420 | 991 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC02303-202 | ENST00000554711 | 531 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC092868.3-201 | ENST00000560515 | 784 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC007333.2-201 | ENST00000569998 | 559 nt | TSL 4 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC01791-201 | ENST00000589511 | 677 nt | TSL 5 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | ZNF616-203 | ENST00000597013 | 577 nt | TSL 4 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | IGKV1OR2-118-201 | ENST00000603238 | 347 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL049634.3-201 | ENST00000604968 | 457 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL591034.3-201 | ENST00000605511 | 685 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC02335-201 | ENST00000616578 | 659 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL139089.1-201 | ENST00000620372 | 975 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC024560.2-201 | ENST00000507981 | 1497 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | EVI5-208 | ENST00000540033 | 7436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.39 | □□□□□ -1.87 | | |
| MUC1 | P15941 | LINC02393-202 | ENST00000614177 | 1993 nt | TSL 2 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | OR8H1-201 | ENST00000313022 | 1038 nt | APPRIS P2 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RNA5SP130-201 | ENST00000364431 | 114 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | MIR421-201 | ENST00000365696 | 85 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | CD84-204 | ENST00000368048 | 1098 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | CD84-205 | ENST00000368051 | 965 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | CTNNAL1-203 | ENST00000374594 | 824 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RNA5SP317-201 | ENST00000410176 | 116 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RNA5SP311-201 | ENST00000411290 | 116 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL353608.1-201 | ENST00000419576 | 416 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC034195.1-201 | ENST00000420000 | 559 nt | TSL 4 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | FAM204CP-201 | ENST00000424489 | 642 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | RPS27AP12-201 | ENST00000429552 | 465 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL590302.1-201 | ENST00000431017 | 359 nt | TSL 2 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL136987.1-201 | ENST00000434300 | 396 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC083863.1-201 | ENST00000438811 | 231 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AL139275.2-201 | ENST00000444731 | 539 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | HSFY6P-201 | ENST00000445573 | 403 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | CCRL1P1-201 | ENST00000449542 | 1053 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| MUC1 | P15941 | AC010890.1-201 | ENST00000454699 | 469 nt | TSL 4 BASIC | 3.38 | □□□□□ -1.87 | | |