Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT3P12035 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRT3P12035 SNORA56-201ENST00000383966 129 ntBASIC4.34□□□□□ -1.71
KRT3P12035 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRT3P12035 PGBD4P8-201ENST00000412993 562 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT3P12035 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT3P12035 AL606495.1-201ENST00000422100 813 ntBASIC4.34□□□□□ -1.71
KRT3P12035 RPL23AP38-201ENST00000423801 469 ntBASIC4.34□□□□□ -1.71
KRT3P12035 MRPL50P1-201ENST00000431951 384 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 RPL7P29-201ENST00000437151 728 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC006011.1-201ENST00000442758 349 ntBASIC4.34□□□□□ -1.71
KRT3P12035 MTND2P39-201ENST00000457230 764 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT3P12035 RPL32P14-201ENST00000463196 378 ntBASIC4.34□□□□□ -1.71
KRT3P12035 CYCSP20-201ENST00000473154 315 ntBASIC4.34□□□□□ -1.71
KRT3P12035 S100A11P1-201ENST00000477525 312 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC105137.1-201ENST00000484355 562 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT3P12035 NAMPTP2-201ENST00000505629 1115 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 AC018797.3-201ENST00000513388 1241 ntBASIC4.34□□□□□ -1.71
KRT3P12035 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT3P12035 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT3P12035 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 RPL23AP87-202ENST00000573039 466 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.34□□□□□ -1.71
KRT3P12035 AC011477.5-201ENST00000586571 259 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT3P12035 VN1R84P-201ENST00000593697 235 ntBASIC4.34□□□□□ -1.71
KRT3P12035 ABI1P1-201ENST00000603375 1120 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC016542.1-201ENST00000608259 493 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC090246.1-201ENST00000616499 426 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC253576.2-201ENST00000618815 580 ntBASIC4.34□□□□□ -1.71
KRT3P12035 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT3P12035 MIR8059-201ENST00000620427 81 ntBASIC4.34□□□□□ -1.71
KRT3P12035 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 AL138960.2-201ENST00000625145 535 ntBASIC4.34□□□□□ -1.71
KRT3P12035 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT3P12035 AC132825.7-201ENST00000638744 335 ntBASIC4.34□□□□□ -1.71
KRT3P12035 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
KRT3P12035 LARP1BP1-201ENST00000506036 1359 ntBASIC4.34□□□□□ -1.71
KRT3P12035 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRT3P12035 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.34□□□□□ -1.72
KRT3P12035 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
KRT3P12035 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT3P12035 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT3P12035 AC116667.1-201ENST00000604855 2072 ntBASIC4.33□□□□□ -1.72
KRT3P12035 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 MTCO1P18-201ENST00000455518 1419 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AC005261.4-201ENST00000600047 1385 ntBASIC4.33□□□□□ -1.72
KRT3P12035 OR11H5P-202ENST00000641612 1325 ntBASIC4.33□□□□□ -1.72
KRT3P12035 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 RNA5SP513-201ENST00000364648 118 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 NANOGP6-201ENST00000429190 847 ntBASIC4.33□□□□□ -1.72
KRT3P12035 ELOCP18-201ENST00000434209 337 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT3P12035 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 AL451050.1-201ENST00000450126 415 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT3P12035 RN7SL481P-201ENST00000477764 299 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AC015908.1-201ENST00000478739 476 ntBASIC4.33□□□□□ -1.72
KRT3P12035 RPL21P47-201ENST00000483696 477 ntBASIC4.33□□□□□ -1.72
KRT3P12035 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 HMGN1P15-201ENST00000513870 295 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT3P12035 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT3P12035 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT3P12035 AC068790.5-201ENST00000602741 355 ntBASIC4.33□□□□□ -1.72
KRT3P12035 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 AP005229.2-201ENST00000609980 697 ntBASIC4.33□□□□□ -1.72
KRT3P12035 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 AC123768.4-201ENST00000616244 701 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AC018926.1-201ENST00000616335 435 ntBASIC4.33□□□□□ -1.72
KRT3P12035 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT3P12035 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 AC083865.1-201ENST00000636634 831 ntBASIC4.33□□□□□ -1.72
KRT3P12035 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT3P12035 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT3P12035 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT3P12035 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms