Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC234782.4-201ENST00000417646 1048 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MTCYBP45-201ENST00000435243 565 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AP000936.3-201ENST00000438127 255 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL450263.2-201ENST00000439400 589 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RPS4XP4-201ENST00000443195 763 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC105399.1-202ENST00000447303 205 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RPL18AP17-201ENST00000455326 198 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 OR52A4P-201ENST00000472867 958 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 LRRC34P2-201ENST00000514850 553 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNA5SP228-201ENST00000516232 133 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC027309.2-201ENST00000520566 192 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AF279873.1-201ENST00000523393 313 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC087276.1-201ENST00000529659 480 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL157394.1-201ENST00000562983 1224 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MIR3913-1-201ENST00000577744 102 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MIR4795-201ENST00000584182 89 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL161729.3-201ENST00000603533 673 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL596327.1-201ENST00000603629 213 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 PROS2P-201ENST00000474651 1951 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 AC135352.1-201ENST00000506173 1418 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 PABPC1P8-201ENST00000452851 2086 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 RNA5SP305-201ENST00000362665 119 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 CALM2P3-201ENST00000400429 449 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC007742.1-201ENST00000425789 329 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC005534.2-201ENST00000431047 433 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AL365184.2-201ENST00000431139 435 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 ELOCP26-201ENST00000436067 329 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 HMGN1P13-201ENST00000505795 138 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AP000676.2-201ENST00000529711 301 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 MIR4311-201ENST00000580794 100 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 KPNA2P3-201ENST00000584190 848 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC069304.2-201ENST00000605154 435 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC107214.2-201ENST00000608204 634 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AL445264.1-201ENST00000621719 171 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AC090574.1-201ENST00000623186 233 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 MIR6863-201ENST00000636112 90 ntBASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CSB-PGBD3P0DP91 AL138820.1-201ENST00000617901 5305 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 MIR133B-201ENST00000362210 119 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-216P-201ENST00000363282 104 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 Y_RNA.460-201ENST00000384255 102 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 Y_RNA.548-201ENST00000384656 105 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-248P-201ENST00000410720 107 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms