Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPL7P44-201ENST00000424827 742 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 OR6C71P-201ENST00000432580 913 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 RPL7P48-201ENST00000461513 746 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 RN7SL594P-201ENST00000470590 287 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 AC022795.1-201ENST00000473808 480 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 RPL7P23-201ENST00000493874 747 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 AC080014.1-201ENST00000496877 1201 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 HMGB3P13-201ENST00000511263 607 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A1P02462 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.21□□□□□ -1.74
COL4A1P02462 AC027807.1-201ENST00000559921 996 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A1P02462 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A1P02462 AC084036.1-201ENST00000609190 508 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 AC015813.4-201ENST00000610469 179 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A1P02462 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
COL4A1P02462 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A1P02462 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 MUC2-202ENST00000613187 4845 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
COL4A1P02462 RSL24D1P1-201ENST00000404972 493 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 RNA5SP229-201ENST00000410809 99 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 OR4K6P-201ENST00000416478 897 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 BOLA3P4-201ENST00000418151 400 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 BX842559.1-201ENST00000419615 532 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 HSPE1P27-201ENST00000430808 296 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AC006994.1-201ENST00000438212 839 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 RPL37P3-201ENST00000456825 293 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AP001486.1-201ENST00000463339 476 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A1P02462 AC097462.2-201ENST00000504623 481 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AC004069.2-201ENST00000505438 1114 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.2□□□□□ -1.74
COL4A1P02462 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
COL4A1P02462 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A1P02462 EIF1P6-201ENST00000600054 334 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 AP003392.5-201ENST00000607857 415 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL4A1P02462 AL353743.1-202ENST00000431724 1695 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 HSPA8P19-201ENST00000505359 1517 ntBASIC4.2□□□□□ -1.74
COL4A1P02462 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
COL4A1P02462 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A1P02462 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A1P02462 RNU1-18P-201ENST00000363062 164 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 AL136131.1-201ENST00000406079 803 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 JKAMPP1-201ENST00000413804 919 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 RPSAP41-201ENST00000439695 860 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A1P02462 AC097262.1-201ENST00000452559 548 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.19□□□□□ -1.74
COL4A1P02462 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 EIF4BP1-201ENST00000554881 351 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 ATP5A1P2-202ENST00000616464 443 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A1P02462 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL4A1P02462 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A1P02462 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
COL4A1P02462 Z99755.1-201ENST00000414048 380 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 OR2X1P-201ENST00000421144 687 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 RPS26P47-201ENST00000427219 348 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 UBE2V1P1-201ENST00000430836 445 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 RPL12P18-201ENST00000437175 325 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 RPS26P3-201ENST00000470205 348 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 AC004057.1-201ENST00000485827 348 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 RPS3AP50-201ENST00000487064 803 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A1P02462 AC124312.4-201ENST00000605533 310 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A1P02462 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 AC233309.1-201ENST00000619522 751 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 AC079298.2-201ENST00000623885 459 ntBASIC4.19□□□□□ -1.74
COL4A1P02462 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL4A1P02462 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A1P02462 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COL4A1P02462 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL4A1P02462 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A1P02462 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.18□□□□□ -1.74
COL4A1P02462 AC087190.4-201ENST00000574616 8334 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL4A1P02462 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL4A1P02462 SNORA54-201ENST00000384281 123 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 HSPE1P8-201ENST00000406997 288 ntBASIC4.18□□□□□ -1.74
COL4A1P02462 RN7SL807P-201ENST00000470923 297 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms