Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SSX4O60224 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SSX4O60224 RNU1-108P-201ENST00000362556 161 ntBASIC4.23□□□□□ -1.73
SSX4O60224 RNU6-984P-201ENST00000363236 109 ntBASIC4.23□□□□□ -1.73
SSX4O60224 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
SSX4O60224 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 ANAPC10P1-201ENST00000395991 556 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 AL592310.1-201ENST00000414330 671 ntBASIC4.23□□□□□ -1.73
SSX4O60224 OR4K6P-201ENST00000416478 897 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 MOB1AP1-201ENST00000430903 535 ntBASIC4.23□□□□□ -1.73
SSX4O60224 RPL7P11-201ENST00000437586 658 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX4O60224 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX4O60224 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX4O60224 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 MRPS33P2-201ENST00000507850 322 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC109471.1-201ENST00000511631 612 ntBASIC4.23□□□□□ -1.73
SSX4O60224 RN7SKP96-201ENST00000516948 297 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX4O60224 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX4O60224 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX4O60224 SERPINE4P-201ENST00000554978 281 ntBASIC4.23□□□□□ -1.73
SSX4O60224 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 AC090515.3-201ENST00000560431 315 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 MTND3P13-201ENST00000574391 343 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC209154.1-201ENST00000582156 337 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AL450336.1-201ENST00000605180 586 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AP001002.2-201ENST00000625137 386 ntBASIC4.23□□□□□ -1.73
SSX4O60224 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 MTND4P10-201ENST00000446199 1363 ntBASIC4.23□□□□□ -1.73
SSX4O60224 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SSX4O60224 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX4O60224 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.23□□□□□ -1.73
SSX4O60224 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX4O60224 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX4O60224 RNU1-32P-201ENST00000363937 159 ntBASIC4.22□□□□□ -1.73
SSX4O60224 RNU6-707P-201ENST00000364647 95 ntBASIC4.22□□□□□ -1.73
SSX4O60224 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 SNORA70.10-201ENST00000384515 134 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AL136310.1-201ENST00000404926 654 ntBASIC4.22□□□□□ -1.73
SSX4O60224 RNA5SP113-201ENST00000410486 84 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 CEACAMP8-201ENST00000413902 580 ntBASIC4.22□□□□□ -1.73
SSX4O60224 SSR1P2-201ENST00000415208 787 ntBASIC4.22□□□□□ -1.73
SSX4O60224 COX6CP17-201ENST00000421389 185 ntBASIC4.22□□□□□ -1.73
SSX4O60224 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
SSX4O60224 RPF2P1-201ENST00000424137 906 ntBASIC4.22□□□□□ -1.73
SSX4O60224 C4BPAP2-201ENST00000428434 478 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC068287.1-201ENST00000430283 295 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 AL035246.1-201ENST00000433554 1255 ntBASIC4.22□□□□□ -1.73
SSX4O60224 NANOGP2-201ENST00000435391 727 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC004938.1-201ENST00000438468 308 ntBASIC4.22□□□□□ -1.73
SSX4O60224 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 AC069285.2-201ENST00000440210 275 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 RPS27AP15-201ENST00000447672 466 ntBASIC4.22□□□□□ -1.73
SSX4O60224 RPL7P59-201ENST00000447700 943 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AL589880.1-201ENST00000448271 287 ntBASIC4.22□□□□□ -1.73
SSX4O60224 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 AC011037.1-201ENST00000483964 558 ntBASIC4.22□□□□□ -1.73
SSX4O60224 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 AC020699.1-201ENST00000505161 445 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC011352.3-201ENST00000505162 593 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 RNU6-202P-201ENST00000515998 96 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC090819.1-201ENST00000523800 1111 ntBASIC4.22□□□□□ -1.73
SSX4O60224 OR4C2P-201ENST00000530855 1064 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 OR8K4P-201ENST00000534608 872 ntBASIC4.22□□□□□ -1.73
SSX4O60224 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX4O60224 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX4O60224 MIR4697-201ENST00000582977 78 ntBASIC4.22□□□□□ -1.73
SSX4O60224 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX4O60224 RPL26P30-202ENST00000602923 645 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms