Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN3O15551 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN3O15551 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN3O15551 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN3O15551 MIR4286-201ENST00000580651 93 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN3O15551 PCNAP1-202ENST00000595299 752 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 AC015849.2-201ENST00000605738 409 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 AL355802.4-201ENST00000607635 548 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN3O15551 MIR6875-201ENST00000617506 72 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN3O15551 MIR6500-201ENST00000622700 86 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN3O15551 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN3O15551 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN3O15551 AC097504.1-201ENST00000515103 2415 ntBASIC4.37□□□□□ -1.71
CLDN3O15551 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CLDN3O15551 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN3O15551 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN3O15551 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CLDN3O15551 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN3O15551 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 RNU6-883P-201ENST00000384597 107 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 CR848007.2-201ENST00000424918 787 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 MTND4LP7-201ENST00000431728 294 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 ELOCP11-201ENST00000436690 332 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 ELOCP16-201ENST00000444494 332 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 AC139783.2-201ENST00000504847 1145 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC010460.1-201ENST00000507087 466 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 AC022790.1-201ENST00000522872 204 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 DEFB109D-201ENST00000529497 240 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 POLR2KP1-201ENST00000553226 168 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AL121594.4-201ENST00000556211 1196 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC022968.1-201ENST00000567372 442 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC120057.2-201ENST00000571520 271 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 MTND4LP24-201ENST00000572277 291 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 AC053481.4-201ENST00000583164 216 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN3O15551 AL606490.9-201ENST00000603331 271 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC015802.5-201ENST00000607478 399 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC067852.7-201ENST00000623270 535 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 AC024023.1-201ENST00000624530 922 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 MTND4P31-201ENST00000425607 1343 ntBASIC4.36□□□□□ -1.71
CLDN3O15551 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN3O15551 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN3O15551 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CLDN3O15551 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN3O15551 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN3O15551 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CLDN3O15551 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN3O15551 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN3O15551 RAD1P1-201ENST00000231383 813 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN3O15551 RNU6-1279P-201ENST00000383917 103 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 NPM1P10-201ENST00000398310 865 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 HMGB1P13-201ENST00000406019 642 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 SNORA3C-201ENST00000408792 125 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 RPS20P25-201ENST00000412447 352 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 AC234782.4-201ENST00000417646 1048 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 AL031736.2-201ENST00000426573 787 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 VDAC1P6-201ENST00000430062 855 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 HIGD1AP4-201ENST00000430194 280 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN3O15551 ZNF965P-201ENST00000432501 817 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 AL035458.1-201ENST00000433096 585 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN3O15551 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLDN3O15551 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN3O15551 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN3O15551 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN3O15551 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.35□□□□□ -1.71
CLDN3O15551 RNA5SP179-201ENST00000517284 121 ntBASIC4.35□□□□□ -1.71
CLDN3O15551 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN3O15551 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms