Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC140172.1-201ENST00000502928 141 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 FTH1P24-201ENST00000503502 462 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC093755.1-201ENST00000512950 1023 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 ZNF321P-202ENST00000550843 495 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC022662.1-201ENST00000580252 331 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC103987.3-201ENST00000582071 292 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 NBR2-204ENST00000587322 63 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM38O00635 VN1R78P-201ENST00000597393 564 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC107304.1-201ENST00000604229 296 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC025588.2-201ENST00000604851 466 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 AP000676.3-201ENST00000623299 569 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
TRIM38O00635 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM38O00635 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM38O00635 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM38O00635 AC114546.3-201ENST00000623582 1734 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
TRIM38O00635 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
TRIM38O00635 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 BTF3L4P1-201ENST00000413813 468 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 TIMM9P2-201ENST00000419324 266 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC233981.1-201ENST00000423224 461 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC245028.1-201ENST00000423259 256 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 Z93242.1-201ENST00000427102 353 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 MOB1AP1-201ENST00000430903 535 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 CEACAMP1-201ENST00000434624 1035 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC092393.1-201ENST00000439625 742 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AL138878.2-201ENST00000440581 1241 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 BMI1P1-201ENST00000445879 941 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM38O00635 RPL23AP15-201ENST00000450202 459 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC084024.2-201ENST00000503480 791 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC109927.2-201ENST00000506416 303 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 COX6B1P5-201ENST00000509843 249 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC138938.1-201ENST00000515431 782 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC107918.3-201ENST00000533272 382 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC022069.1-201ENST00000582910 658 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC004987.4-201ENST00000603383 338 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM38O00635 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM38O00635 AC023158.2-201ENST00000614876 543 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AL603839.4-201ENST00000624658 1005 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AP003400.5-201ENST00000624827 617 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 AC005609.4-201ENST00000625071 447 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM38O00635 AC099654.13-201ENST00000639774 207 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM38O00635 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM38O00635 BTBD10P1-201ENST00000549824 1352 ntBASIC5.02□□□□□ -1.61
TRIM38O00635 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC063976.2-201ENST00000425667 3556 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms