Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 MRPS35P3-201ENST00000603189 709 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AL355802.4-201ENST00000607635 548 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 CR589904.2-201ENST00000612533 440 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC093535.2-201ENST00000624769 2326 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 HPVC1-201ENST00000629899 1198 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 DDX18P3-201ENST00000404856 2007 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 SNORA5A-201ENST00000384111 134 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 RPL7P60-201ENST00000397636 735 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 RNA5SP306-201ENST00000411087 107 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 SYF2P2-201ENST00000417620 583 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL035423.1-201ENST00000420331 213 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MTND4LP14-201ENST00000429447 288 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 NDUFA5P10-201ENST00000432147 357 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL691517.1-201ENST00000440833 1235 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 XKRY2-201ENST00000442362 1093 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 SETD6P1-201ENST00000444575 317 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 CASP3P1-201ENST00000446037 609 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MTCO1P31-201ENST00000506355 492 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MTCYBP19-201ENST00000517463 1124 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC008802.1-201ENST00000519121 791 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 GTF2IP22-201ENST00000554443 182 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 SETP1-201ENST00000556014 845 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AC087190.4-201ENST00000574616 8334 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMIM28A0A1B0GU29 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 SPATA2P1-201ENST00000431223 2055 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 RNU6-883P-201ENST00000384597 107 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 RANP4-201ENST00000413361 655 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 TMX2P1-201ENST00000436507 708 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 MTND6P18-201ENST00000439477 513 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 HMGB1P3-201ENST00000502802 616 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 CDH12P2-201ENST00000504393 298 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 RNA5SP208-201ENST00000516156 78 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AL137849.1-201ENST00000604767 169 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 SNORA51-201ENST00000606420 132 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AC135803.1-201ENST00000608748 565 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 AL034408.1-202ENST00000636088 415 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 BX005019.1-201ENST00000561881 1810 ntBASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms