Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC018529.3-201ENST00000624212 2254 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SNX9Q9Y5X1 CCT8P1-201ENST00000413611 1657 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 SNORA62-201ENST00000365493 153 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 RNU6-932P-201ENST00000391108 106 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 RNA5SP498-201ENST00000411342 120 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 HMGB3P31-201ENST00000413333 595 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 COX6CP17-201ENST00000421389 185 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CDY14P-201ENST00000431260 1014 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CDY12P-201ENST00000440679 1015 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC114495.1-201ENST00000441274 436 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CDY13P-201ENST00000445813 1015 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CDY23P-201ENST00000451661 1014 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 VN1R32P-201ENST00000452234 905 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 RNU7-27P-201ENST00000459281 62 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 DEFB109F-201ENST00000491870 277 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC134050.1-201ENST00000495088 933 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 OR10V3P-201ENST00000525712 725 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC090515.3-201ENST00000560431 315 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL109741.3-201ENST00000561748 592 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC024060.1-201ENST00000607052 494 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 MIR6810-201ENST00000622701 70 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AC019226.2-201ENST00000625973 424 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 AL356489.2-201ENST00000566968 3528 ntBASIC4.71□□□□□ -1.66
SNX9Q9Y5X1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC091046.3-201ENST00000631455 1574 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 U6.112-201ENST00000384129 70 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 MIR92A2-201ENST00000385299 75 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RNU6-244P-201ENST00000391028 104 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC011933.1-201ENST00000413334 321 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RPL21P108-201ENST00000413857 481 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 MTCO3P4-201ENST00000419236 787 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RPS3AP54-201ENST00000435535 734 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 IFNWP4-201ENST00000453148 294 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC005229.2-201ENST00000456995 399 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC116533.1-201ENST00000459748 321 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RN7SL303P-201ENST00000469773 251 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC108022.1-201ENST00000493466 478 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 RN7SL812P-201ENST00000493791 279 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 DUXAP5-201ENST00000529668 529 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 MTND3P12-201ENST00000559068 328 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC084757.1-201ENST00000559987 490 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 SS18L2P2-201ENST00000583960 235 ntBASIC4.7□□□□□ -1.66
SNX9Q9Y5X1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms