Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHGA11Q9Y5H2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC062022.1-201ENST00000451026 1684 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 STAG3L4-201ENST00000352103 530 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 SNORA38B-201ENST00000363524 131 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 U3.11-201ENST00000364476 212 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 RNU6-903P-201ENST00000391270 109 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AL356057.3-201ENST00000402607 340 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC074085.1-201ENST00000413598 418 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AL358176.2-201ENST00000425769 204 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MED13P1-201ENST00000428342 171 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL3P11-201ENST00000434028 1146 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AMYP1-201ENST00000440059 1023 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC093767.1-201ENST00000504523 156 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC093878.1-201ENST00000515630 432 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC097467.4-201ENST00000605504 141 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC010424.2-201ENST00000607594 443 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 MIR8082-201ENST00000612488 81 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AL596245.1-201ENST00000618994 362 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 AC007546.1-201ENST00000619452 559 ntBASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGA11Q9Y5H2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 AC130650.2-201ENST00000618736 2403 ntBASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 MTND4P14-201ENST00000435799 1354 ntBASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 AC066616.2-201ENST00000559334 1481 ntBASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHGA11Q9Y5H2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP321-201ENST00000362722 111 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-552P-201ENST00000362869 119 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU5A-8P-201ENST00000364102 114 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC117470.1-201ENST00000381974 330 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL359694.1-201ENST00000403247 604 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL139100.1-201ENST00000408001 498 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 NME1P1-201ENST00000420914 382 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC234779.1-201ENST00000425910 285 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS3AP52-201ENST00000435639 297 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL356133.1-201ENST00000444762 372 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AP001992.1-205ENST00000462248 379 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC006511.1-201ENST00000470614 315 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 RPL37P23-201ENST00000492641 294 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 SNX18P24-201ENST00000505249 671 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 PRMT5P1-201ENST00000514351 598 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC104057.1-201ENST00000515547 497 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 Y_RNA.682-201ENST00000516457 100 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 CYCSP22-201ENST00000517555 339 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 PCNAP4-201ENST00000532690 730 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 OR5B10P-201ENST00000532869 642 ntBASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGA11Q9Y5H2 AC007068.2-201ENST00000543168 395 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms