Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL356274.1-201ENST00000617064 410 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TMEM75-201ENST00000624314 2165 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL391684.1-202ENST00000641293 1636 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1207P-201ENST00000384343 107 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1127P-201ENST00000384580 107 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 U3.20-201ENST00000390909 217 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AL034374.1-201ENST00000406329 351 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RPS21P1-201ENST00000434479 247 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL325P-201ENST00000460434 283 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC021074.2-201ENST00000468434 172 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL282P-201ENST00000479676 297 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC096745.1-201ENST00000509945 370 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC093816.1-201ENST00000515076 913 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 MTND5P41-201ENST00000517498 206 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 STX3-204ENST00000530221 534 ntTSL 5 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC018523.1-201ENST00000534211 512 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 MRPS36P4-201ENST00000534436 298 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AL049869.4-201ENST00000555669 178 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 AC010168.2-201ENST00000562691 5428 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.15□□□□□ -1.26
VPS9D1Q9Y2B5 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 AL034417.4-202ENST00000642135 2236 ntBASIC7.15□□□□□ -1.27
VPS9D1Q9Y2B5 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RN7SKP62-201ENST00000384539 329 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RNU6-441P-201ENST00000384545 106 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 Z95327.2-201ENST00000414579 1873 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 GAPDHP69-201ENST00000425504 1008 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 RPL23AP4-201ENST00000427757 463 ntBASIC7.14□□□□□ -1.27
VPS9D1Q9Y2B5 AL158071.1-201ENST00000430315 461 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms