Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC114781.3-201ENST00000512083 142 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RNA5SP116-201ENST00000516132 98 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-764P-201ENST00000516396 105 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC112191.2-201ENST00000522428 333 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RPA2P3-201ENST00000533268 770 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RRN3P3-201ENST00000549207 578 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RNU4ATAC-201ENST00000580972 127 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC020916.2-201ENST00000591242 360 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC021646.1-201ENST00000605469 484 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL591167.1-201ENST00000607321 456 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AC062037.2-201ENST00000610137 73 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AL356585.4-201ENST00000623078 1229 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RBPJP7-201ENST00000442803 1447 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 RBPJP5-201ENST00000449433 1447 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 AF287957.1-201ENST00000607368 1595 ntBASIC7.76□□□□□ -1.17
PDZRN3Q9UPQ7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-1322P-201ENST00000364309 107 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RNU1-59P-201ENST00000364829 162 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RNY4P36-201ENST00000391116 96 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL121835.1-201ENST00000404250 354 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL391361.1-201ENST00000405580 489 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RPL36AP53-201ENST00000432891 316 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 H2AFZP6-201ENST00000444403 394 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 C1DP4-201ENST00000455429 424 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC124945.1-201ENST00000485133 188 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 BTF3P12-201ENST00000519620 469 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC008429.4-201ENST00000521201 182 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 OR4A45P-201ENST00000529954 901 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 PCNAP4-201ENST00000532690 730 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 MIR6809-201ENST00000612189 116 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 U1.25-201ENST00000614085 162 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 U1.34-201ENST00000618578 162 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL445670.1-201ENST00000618889 801 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 U1.31-201ENST00000620022 160 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AL136228.1-201ENST00000622221 319 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC091953.5-201ENST00000622919 233 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC244517.12-201ENST00000623581 663 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC138393.1-206ENST00000540997 1886 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 AC024560.2-201ENST00000507981 1497 ntBASIC7.75□□□□□ -1.17
PDZRN3Q9UPQ7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 MAPK10-261ENST00000641050 3109 ntBASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 AC092447.10-201ENST00000620607 1652 ntBASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-433P-201ENST00000363216 104 ntBASIC7.74□□□□□ -1.17
PDZRN3Q9UPQ7 RNU6-774P-201ENST00000363238 107 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms