Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CDRT1-208ENST00000630868 794 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL031985.3-201ENST00000565390 2449 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 SNORD35B-201ENST00000363660 87 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 RNA5SP239-201ENST00000410218 129 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC073464.3-201ENST00000422564 712 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 TPTE2P3-201ENST00000441562 1189 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC245517.2-201ENST00000442890 346 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 RPS11P1-201ENST00000451072 473 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AL133477.1-201ENST00000457472 514 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 RPL23AP71-201ENST00000470966 469 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC108157.1-201ENST00000510511 539 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 RNU7-143P-201ENST00000516781 65 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC120057.2-201ENST00000571520 271 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AL645927.2-201ENST00000618350 349 ntBASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLIP2Q9UDT6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 ZNF603P-201ENST00000405613 487 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 SNORA3C-201ENST00000408792 125 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 RN7SKP27-201ENST00000410684 333 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC073069.1-201ENST00000428657 441 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AP002345.1-201ENST00000456493 928 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 HMGB1P47-201ENST00000511281 589 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 NPM1P41-201ENST00000512920 831 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AC012414.2-201ENST00000559474 187 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 MIR4716-201ENST00000579628 84 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AL451044.1-201ENST00000604867 238 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 BX322635.1-201ENST00000605804 496 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 AL359715.5-201ENST00000623431 443 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 LINC00216-201ENST00000623548 1126 ntBASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLIP2Q9UDT6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 RNU6-31P-201ENST00000384388 108 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AL589655.1-201ENST00000405398 482 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 PGBD4P8-201ENST00000412993 562 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 MTND2P25-201ENST00000449028 610 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC108120.2-201ENST00000512973 294 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 MTND1P6-201ENST00000523621 946 ntBASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.73□□□□□ -1.65
CLIP2Q9UDT6 AC107016.1-201ENST00000550463 337 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms