Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC009101.1-201ENST00000568135 242 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC099489.2-201ENST00000574976 260 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 MIR4644-201ENST00000579929 84 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC110741.2-201ENST00000605278 268 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL096803.3-201ENST00000609032 532 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL136295.6-201ENST00000610486 658 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL627171.1-201ENST00000618845 1308 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
VPS29Q9UBQ0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS29Q9UBQ0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS29Q9UBQ0 CR381670.1-201ENST00000624291 1693 ntBASIC3.59□□□□□ -1.84
VPS29Q9UBQ0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
VPS29Q9UBQ0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 SNORA70.2-201ENST00000364506 135 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 MTCO3P16-201ENST00000454456 754 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC091515.1-201ENST00000548110 679 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC087888.1-201ENST00000550884 1254 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 PARP1P2-201ENST00000556806 195 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AGGF1P6-201ENST00000569213 976 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 MIR4458-201ENST00000578872 75 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 FP236240.3-201ENST00000623061 327 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 FAM91A3P-201ENST00000456826 2544 ntBASIC3.58□□□□□ -1.84
VPS29Q9UBQ0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 SNORA62.2-201ENST00000364672 152 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RPL7P4-203ENST00000430239 730 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC093716.1-201ENST00000435923 377 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 PPIAP17-201ENST00000438507 471 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 CALM1P2-201ENST00000452941 448 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC099563.1-201ENST00000456086 418 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC005229.2-201ENST00000456995 399 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC005912.1-201ENST00000495392 255 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AL139099.1-201ENST00000497398 403 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 RNU6-352P-201ENST00000516908 107 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS29Q9UBQ0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms