Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC068790.6-201ENST00000602558 258 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 BNIP3P4-201ENST00000604946 565 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AL359757.1-201ENST00000623176 255 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 CASC19-206ENST00000641028 1430 ntBASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
DKK3Q9UBP4 TLK1P1-201ENST00000456760 2440 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AP000526.1-201ENST00000603308 1388 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RN7SKP104-201ENST00000362605 328 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RNA5SP428-201ENST00000365129 132 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RNU6-146P-201ENST00000384602 108 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 MIR525-201ENST00000384978 85 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 HSPD1P16-201ENST00000402302 394 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL121978.1-201ENST00000402778 359 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL078595.1-201ENST00000404458 226 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RNU6-757P-201ENST00000410334 100 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC007435.1-201ENST00000421086 415 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL139421.1-201ENST00000423010 169 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RPL21P43-201ENST00000425440 472 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RHOT1P3-201ENST00000436571 331 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RPS29P9-201ENST00000440360 171 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 MTND3P1-201ENST00000441336 220 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL360221.1-201ENST00000445989 335 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL162388.1-201ENST00000450912 352 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 OR52E3P-201ENST00000452083 936 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 RPL21P134-201ENST00000453468 483 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC110775.1-201ENST00000513721 462 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC007115.1-201ENST00000546853 234 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC079171.1-201ENST00000568788 914 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC011487.3-201ENST00000593607 453 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 VN1R82P-201ENST00000601481 356 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 MEMO1P5-201ENST00000604810 406 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC004223.4-201ENST00000612426 332 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC091932.2-201ENST00000623014 291 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 AC145207.9-201ENST00000623802 325 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
DKK3Q9UBP4 SCN1A-220ENST00000641603 12506 ntBASIC5.09□□□□□ -1.59
DKK3Q9UBP4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 AC114546.3-201ENST00000623582 1734 ntBASIC5.09□□□□□ -1.6
DKK3Q9UBP4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
DKK3Q9UBP4 CCT8P1-201ENST00000413611 1657 ntBASIC5.08□□□□□ -1.6
DKK3Q9UBP4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DKK3Q9UBP4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
DKK3Q9UBP4 KARSP3-201ENST00000571212 1504 ntBASIC5.08□□□□□ -1.6
DKK3Q9UBP4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DKK3Q9UBP4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DKK3Q9UBP4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms