Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AC010329.2-201ENST00000595195 2737 ntBASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CUEDC1Q9NWM3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CUEDC1Q9NWM3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.52□□□□□ -1.36
CUEDC1Q9NWM3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CUEDC1Q9NWM3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.52□□□□□ -1.36
CUEDC1Q9NWM3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC009229.4-201ENST00000623854 1947 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC007406.5-201ENST00000570140 3170 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 RNA5SP122-201ENST00000384457 108 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC074085.1-201ENST00000413598 418 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC006509.1-201ENST00000420788 634 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 PTPN2P1-201ENST00000423212 1072 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 PFN1P11-201ENST00000445829 389 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC007383.1-201ENST00000445875 636 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AL392103.1-201ENST00000447000 198 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 RPL12P31-201ENST00000478433 450 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 MTND6P8-201ENST00000503471 522 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 VN1R104P-201ENST00000505115 1009 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC091885.1-201ENST00000506658 268 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 OR4D12P-201ENST00000509361 911 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-864P-201ENST00000516256 108 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AF279873.1-201ENST00000523393 313 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AP000827.1-201ENST00000527814 258 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC068831.4-201ENST00000556118 109 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 TVP23CP2-201ENST00000571473 623 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC053481.3-201ENST00000577881 843 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 RPL7AP69-201ENST00000595306 806 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC116447.1-201ENST00000613153 453 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AL157817.1-201ENST00000614264 790 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 LINC02019-201ENST00000608605 2060 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC105074.1-201ENST00000623380 3095 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AP004289.2-201ENST00000444413 1457 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 AC097063.1-201ENST00000426714 1797 ntBASIC6.52□□□□□ -1.37
CUEDC1Q9NWM3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 Z97989.1-201ENST00000531702 2421 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 RN7SKP171-201ENST00000364417 303 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-169P-201ENST00000365336 107 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-730P-201ENST00000383954 104 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-606P-201ENST00000384721 111 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 RNA5SP474-201ENST00000391234 90 ntBASIC6.51□□□□□ -1.37
CUEDC1Q9NWM3 AL121972.1-201ENST00000402023 252 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms