Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 NPM1P35-201ENST00000533043 868 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 MTATP6P24-201ENST00000576835 677 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AL445435.1-201ENST00000604232 665 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC079610.2-201ENST00000604818 690 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AL451044.1-201ENST00000604867 238 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC006946.3-201ENST00000609791 756 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AP004607.9-201ENST00000618202 316 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AL023881.1-201ENST00000621088 301 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC132825.7-201ENST00000638744 335 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 AC053481.2-202ENST00000582394 1500 ntBASIC4.35□□□□□ -1.71
SIX2Q9NPC8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX2Q9NPC8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 OR11H4-201ENST00000315409 1082 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 OR6C69P-201ENST00000394268 893 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 ANAPC10P1-201ENST00000395991 556 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 HSPE1P12-201ENST00000412576 301 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 LINC01347-201ENST00000417964 355 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 HMGB3P5-201ENST00000428894 612 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC000041.1-201ENST00000439655 175 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AL096803.2-201ENST00000450032 677 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC091163.3-201ENST00000518269 1144 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 CYB5AP5-201ENST00000549779 389 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC025627.2-201ENST00000576220 160 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 KPNA2P3-201ENST00000584190 848 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC110743.1-201ENST00000584870 478 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 RN7SL622P-201ENST00000585292 275 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC011374.2-201ENST00000607135 526 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AP000255.1-201ENST00000610276 676 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 AC010435.1-201ENST00000623353 1177 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX2Q9NPC8 MTCO1P7-201ENST00000419523 1542 ntBASIC4.34□□□□□ -1.71
SIX2Q9NPC8 Z82217.1-201ENST00000625157 8149 ntBASIC4.34□□□□□ -1.72
SIX2Q9NPC8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.34□□□□□ -1.72
SIX2Q9NPC8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.34□□□□□ -1.72
SIX2Q9NPC8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SIX2Q9NPC8 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.72
SIX2Q9NPC8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC017007.4-201ENST00000503353 1352 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC005261.4-201ENST00000600047 1385 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 ZNF29P-201ENST00000225587 168 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RNU6-244P-201ENST00000391028 104 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RPS24P12-201ENST00000402084 394 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC016397.1-201ENST00000412463 242 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RPL23AP38-201ENST00000423801 469 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC093422.3-201ENST00000428506 305 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms