Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL353729.1-201ENST00000425044 720 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 OR51AB1P-201ENST00000429046 620 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC018644.1-201ENST00000429934 551 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC108479.1-201ENST00000431142 427 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 RPL22P17-201ENST00000438729 315 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 SEPT14P3-201ENST00000439401 183 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL732372.2-207ENST00000445840 183 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 MRPL50P4-201ENST00000446432 475 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 RBMY2TP-201ENST00000451162 947 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 SEPT14P2-201ENST00000453405 183 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 SEPT14P4-201ENST00000513445 186 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 FO082796.1-201ENST00000523795 183 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 PHBP17-201ENST00000528576 541 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC243972.3-201ENST00000539655 198 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC090241.1-201ENST00000587732 621 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 LLPHP1-201ENST00000603571 367 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC007938.2-201ENST00000604666 2634 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 RLIMP2-201ENST00000427891 1563 ntBASIC5.84□□□□□ -1.48
SSU72Q9NP77 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
SSU72Q9NP77 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SSU72Q9NP77 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
SSU72Q9NP77 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SSU72Q9NP77 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 Y_RNA.46-201ENST00000362695 102 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 Y_RNA.157-201ENST00000363638 102 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 RN7SKP81-201ENST00000365603 331 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL033519.1-201ENST00000407266 307 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC006509.1-201ENST00000420788 634 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL592293.2-201ENST00000422292 996 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL445928.1-201ENST00000435545 222 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL929410.2-201ENST00000451170 189 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 CBX1P2-201ENST00000453841 458 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 SBDSP1-204ENST00000453858 737 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 RPS15AP1-201ENST00000457423 391 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 RN7SL39P-201ENST00000462264 297 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 RPS27AP17-201ENST00000463344 455 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC013356.1-201ENST00000489027 564 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 RPS17P5-201ENST00000498293 408 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC026427.2-201ENST00000506228 536 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC105384.2-201ENST00000508433 640 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC112206.3-201ENST00000514578 389 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC020661.2-201ENST00000560114 134 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC009237.17-201ENST00000618111 748 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms