Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AL513175.1-201ENST00000431492 780 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 NMNAT1P2-201ENST00000435192 860 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AC006517.1-201ENST00000480485 328 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 RNA5SP341-201ENST00000516261 117 ntBASIC3.47□□□□□ -1.85
CHD8Q9HCK8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD8Q9HCK8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 OR5H2-201ENST00000355273 945 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 RSL24D1P4-201ENST00000400938 484 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 MIR1911-201ENST00000410783 80 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 NECAP1P2-201ENST00000455668 727 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC108022.1-201ENST00000493466 478 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 GTF3AP2-201ENST00000557014 266 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 OR4K7P-201ENST00000580232 945 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC124312.6-202ENST00000623624 418 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AP005264.7-201ENST00000625003 745 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 Y_RNA.164-201ENST00000363709 102 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AL139281.1-201ENST00000422120 335 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC021876.1-201ENST00000425959 359 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 ATP5F1P7-201ENST00000567330 760 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 CKS1BP3-201ENST00000600888 237 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 AC139713.2-210ENST00000641741 992 ntBASIC3.46□□□□□ -1.86
CHD8Q9HCK8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD8Q9HCK8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 BX323014.1-201ENST00000412876 237 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 PSMC1P13-201ENST00000458195 985 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC026782.2-201ENST00000510845 636 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC046143.2-201ENST00000609789 160 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC234772.1-201ENST00000377927 937 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 RPL21P110-201ENST00000433345 446 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 RNU7-143P-201ENST00000516781 65 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AC019278.1-201ENST00000623516 479 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 AP001273.1-201ENST00000624493 3152 ntBASIC3.45□□□□□ -1.86
CHD8Q9HCK8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD8Q9HCK8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC093829.1-201ENST00000506662 1618 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC011755.1-201ENST00000623763 2049 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 MIR199A2-201ENST00000385289 110 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AL353692.2-201ENST00000407054 335 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC117434.1-201ENST00000419971 836 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC091862.1-201ENST00000438016 1100 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 AC107083.1-201ENST00000439643 279 ntBASIC3.44□□□□□ -1.86
CHD8Q9HCK8 SETD6P1-201ENST00000444575 317 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms