Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC024060.1-201ENST00000607052 494 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 RN7SL722P-201ENST00000617780 284 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 RN7SL565P-201ENST00000618246 284 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 MIR6891-201ENST00000618788 93 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AP000484.1-201ENST00000620067 1252 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC123767.1-202ENST00000620407 817 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 OR2L1P-202ENST00000641567 1023 ntBASIC4.55□□□□□ -1.68
PCDH9Q9HC56 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH9Q9HC56 AC006971.1-201ENST00000407916 4486 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 NOL8P1-201ENST00000508336 3529 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC073055.1-201ENST00000456901 1621 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AL592182.3-201ENST00000642132 3304 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 METTL21EP-201ENST00000298105 713 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RNU6-543P-201ENST00000362576 108 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RNU6-236P-201ENST00000363886 106 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RNU4-68P-201ENST00000364314 141 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 MIR513B-201ENST00000385136 84 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RNA5SP332-201ENST00000391063 115 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 SNORA11B-201ENST00000408175 129 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 MIR1911-201ENST00000410783 80 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 VPS26BP1-201ENST00000417155 755 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC005005.2-201ENST00000420779 380 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 GTF2IP2-201ENST00000424290 697 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 YWHAEP5-201ENST00000431545 765 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 UBE2V1P3-201ENST00000439651 417 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CR769776.1-201ENST00000441254 787 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AL592437.1-201ENST00000443781 492 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC005002.1-201ENST00000447458 540 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 ABCF2P2-201ENST00000450549 296 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AL354710.1-201ENST00000453641 246 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RPS29P33-201ENST00000456717 146 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RNU7-140P-201ENST00000459546 60 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RPS27AP17-201ENST00000463344 455 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RPL5P30-201ENST00000465511 891 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC096741.1-201ENST00000472250 846 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AP000827.1-201ENST00000527814 258 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 NPM1P47-201ENST00000560843 856 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC084783.1-201ENST00000565846 910 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC095057.3-201ENST00000567102 1157 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CYP4A43P-201ENST00000568156 121 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC023824.3-201ENST00000569003 562 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC245036.5-201ENST00000596330 847 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC234771.5-201ENST00000600161 514 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 GAS5-AS1-201ENST00000602767 694 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC093765.1-201ENST00000603758 881 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AC002487.1-201ENST00000604565 994 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AL031666.3-201ENST00000609320 1006 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AP005019.3-201ENST00000620418 560 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 OR56B2P-202ENST00000641377 2453 ntBASIC4.54□□□□□ -1.68
PCDH9Q9HC56 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH9Q9HC56 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 Z98755.1-201ENST00000407015 1384 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 SEC63P2-201ENST00000503863 1939 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 ENSAP3-201ENST00000312710 333 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RNA5SP52-201ENST00000362448 134 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 Y_RNA.472-201ENST00000384322 102 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 MTCO2P21-201ENST00000419780 677 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RPL7AP25-201ENST00000423357 805 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RPEP3-201ENST00000425462 676 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RPL23AP1-201ENST00000428990 471 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms