Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PTP4A1P7-201ENST00000423476 514 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL732292.1-201ENST00000426692 226 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 RPL23AP25-201ENST00000430973 463 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC016712.1-201ENST00000431088 378 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 RPL23AP93-201ENST00000440847 484 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 NDUFS5P3-201ENST00000450668 321 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 BX248409.1-201ENST00000455497 255 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC013356.1-201ENST00000489027 564 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 HMGB1P38-201ENST00000490557 577 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC010374.2-201ENST00000512933 535 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 PTP4A1P6-201ENST00000531034 478 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 VN1R88P-201ENST00000596787 292 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC103792.1-201ENST00000603591 919 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL158050.2-201ENST00000605336 568 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC097504.2-201ENST00000608088 454 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AF129408.1-201ENST00000608767 431 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL035461.2-201ENST00000619201 524 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AC009269.6-201ENST00000621778 588 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 AL356118.1-201ENST00000635272 1078 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 MTCO1P6-201ENST00000481192 1384 ntBASIC4.12□□□□□ -1.75
UBQLN3Q9H347 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.12□□□□□ -1.75
UBQLN3Q9H347 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 LINC00622-201ENST00000562811 1570 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 NXPH1-205ENST00000602349 1953 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 SNORA51.12-201ENST00000384448 134 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 U3.22-201ENST00000391120 215 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RNU6-77P-201ENST00000410554 91 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC004987.3-201ENST00000413879 771 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 TAF13P2-201ENST00000416876 286 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RAD23BP1-201ENST00000421404 1227 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 NIPA2P1-201ENST00000426223 976 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AP001324.1-201ENST00000428553 399 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RPL37P1-201ENST00000432310 284 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 HSFY7P-201ENST00000432672 318 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RPL21P110-201ENST00000433345 446 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 HSFY8P-201ENST00000437934 318 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 ARF4P4-201ENST00000439608 520 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC004865.1-201ENST00000442276 1003 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MTND1P33-201ENST00000446251 917 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 EIF2S2P2-201ENST00000447161 982 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 SEPT14P24-201ENST00000447236 180 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 HSFY5P-201ENST00000453726 309 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 CDC42P1-201ENST00000456658 548 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RPL7P32-201ENST00000457119 744 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 RN7SL860P-201ENST00000473738 223 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC008427.1-201ENST00000503102 655 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC069306.1-201ENST00000507006 843 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC008694.2-201ENST00000517591 306 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 OR8G5-201ENST00000524943 1041 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC124293.1-201ENST00000530034 493 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 ELOCP28-201ENST00000590044 317 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC009948.4-201ENST00000604692 675 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC010201.1-201ENST00000605051 540 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC010680.4-201ENST00000605334 543 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC099669.2-201ENST00000616549 437 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AC022306.3-201ENST00000619930 550 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MIR7154-201ENST00000620673 73 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 MIR6810-201ENST00000622701 70 ntBASIC4.11□□□□□ -1.75
UBQLN3Q9H347 AL121594.5-201ENST00000631724 573 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms