Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC007688.1-201ENST00000475592 759 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC084198.1-201ENST00000477747 402 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC110792.1-201ENST00000491826 472 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC004069.2-201ENST00000505438 1114 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 RAC1P2-201ENST00000511164 579 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 SNORA70.24-201ENST00000517233 118 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 RPL21P12-201ENST00000559810 515 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 MIR5685-201ENST00000579080 79 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC020914.4-201ENST00000597690 277 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AF131215.7-201ENST00000602443 707 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC007179.3-201ENST00000604976 235 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AL645927.2-201ENST00000618350 349 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AC083899.2-201ENST00000423285 1376 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 RNA5SP119-201ENST00000362715 117 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 MIR491-201ENST00000384877 84 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 ATP5F1P4-201ENST00000397288 746 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 NCSTNP1-201ENST00000406229 144 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 SNORA74D-201ENST00000516404 141 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 EIF1P6-201ENST00000600054 334 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AC091905.1-201ENST00000624400 311 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 FAM35DP-201ENST00000323387 2712 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 AL451142.2-201ENST00000429076 2090 ntBASIC4.57□□□□□ -1.68
UPF3BQ9BZI7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 RNU1-18P-201ENST00000363062 164 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 MIR199A2-201ENST00000385289 110 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC098592.2-201ENST00000413158 265 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 SNORA71B-202ENST00000439232 272 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC092809.1-201ENST00000441469 474 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 MTND6P32-201ENST00000457611 483 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 EIF2S2P4-201ENST00000461070 984 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 FTH1P21-201ENST00000512179 511 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 RNU6-352P-201ENST00000516908 107 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 DUXAP2-201ENST00000519198 589 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 HSPE1P5-201ENST00000561489 272 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 RN7SL703P-201ENST00000578485 302 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AL606490.9-201ENST00000603331 271 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 MIR6500-201ENST00000622700 86 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC012442.3-202ENST00000636742 206 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 PHKBP1-201ENST00000450951 1951 ntBASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPF3BQ9BZI7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 HLFP1-201ENST00000402375 499 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AL445584.1-201ENST00000431451 330 ntBASIC4.55□□□□□ -1.68
UPF3BQ9BZI7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms