Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC022905.1-201ENST00000503430 3048 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AL662795.2-201ENST00000624252 3706 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AC011416.1-201ENST00000514947 1732 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AL442639.1-201ENST00000625030 1899 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AP000756.2-201ENST00000624168 2567 ntBASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LCE3DQ9BYE3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 AC107027.3-201ENST00000565095 3473 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 MTND5P19-201ENST00000424872 1794 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 ZNF734P-201ENST00000419494 1534 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 AC073365.1-203ENST00000641055 1992 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 Z95114.1-201ENST00000624264 14574 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RPL32-201ENST00000273223 567 ntTSL 3 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OR5E1P-201ENST00000305754 927 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 OR52B3P-201ENST00000314715 928 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SNORD3E-201ENST00000362899 217 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP391-201ENST00000363456 119 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNU6-1078P-201ENST00000364522 103 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 U3.14-201ENST00000365363 227 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 AL451142.1-201ENST00000375867 775 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RPL9P21-201ENST00000392269 505 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 TDGF1P4-201ENST00000401555 520 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 SOCS5P5-201ENST00000402732 1586 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 MIR1302-3-201ENST00000408128 138 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RN7SKP152-201ENST00000410444 315 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 RNU6-603P-201ENST00000411403 107 ntBASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LCE3DQ9BYE3 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms