Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC008011.1-201ENST00000545989 227 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AC135507.2-201ENST00000612443 309 ntBASIC5.54□□□□□ -1.52
SCAPERQ9BY12 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SCAPERQ9BY12 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 SNORD17-201ENST00000390930 237 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 RNA5SP104-201ENST00000410989 118 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AL645931.1-201ENST00000439737 410 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 VN1R25P-201ENST00000443385 738 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 RPS6P2-201ENST00000454208 705 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 VN1R40P-201ENST00000455196 941 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AC073522.1-201ENST00000483312 377 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 PHBP14-201ENST00000512887 367 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AC011611.1-201ENST00000552179 197 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AC125494.3-201ENST00000602759 455 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AC074276.2-201ENST00000619891 348 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.53□□□□□ -1.52
SCAPERQ9BY12 MTND4P26-201ENST00000415971 1359 ntBASIC5.53□□□□□ -1.52
SCAPERQ9BY12 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 U3.26-201ENST00000391236 204 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 BX842559.1-201ENST00000419615 532 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 UBE2V1P1-201ENST00000430836 445 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AL035458.1-201ENST00000433096 585 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AC127537.2-201ENST00000439258 465 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AC090877.1-201ENST00000561418 344 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AL139395.1-201ENST00000603662 160 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 MTCO1P22-201ENST00000604619 1360 ntBASIC5.52□□□□□ -1.53
SCAPERQ9BY12 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SCAPERQ9BY12 AL356274.2-201ENST00000624379 3752 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 AC011742.1-201ENST00000431448 434 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 RPS15AP29-201ENST00000445539 400 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 AC093663.1-201ENST00000497190 394 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 MIR3124-201ENST00000582636 67 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 AP000255.1-201ENST00000610276 676 ntBASIC5.51□□□□□ -1.53
SCAPERQ9BY12 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.51□□□□□ -1.53
SCAPERQ9BY12 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 RNA5SP374-201ENST00000362939 125 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 BMS1P3-201ENST00000372011 932 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 UBA52P6-201ENST00000399822 382 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 LAP3P1-201ENST00000403648 294 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 NPM1P25-201ENST00000429734 854 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 MTND6P5-201ENST00000448266 512 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AC009303.3-201ENST00000591103 736 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 MIR7851-201ENST00000610611 160 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AC015722.2-201ENST00000622210 551 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.5□□□□□ -1.53
SCAPERQ9BY12 MAPK10-253ENST00000641010 4072 ntBASIC5.5□□□□□ -1.53
SCAPERQ9BY12 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 MIR448-201ENST00000362131 111 ntBASIC5.49□□□□□ -1.53
SCAPERQ9BY12 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 RPF2P1-201ENST00000424137 906 ntBASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAPERQ9BY12 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms