Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AL035404.1-201ENST00000497982 568 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AC008885.1-201ENST00000514930 301 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AL360157.1-201ENST00000565962 87 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AC021755.1-201ENST00000559747 1447 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 OR5H2-201ENST00000355273 945 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 MAPRE1P3-201ENST00000435438 796 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC005476.1-201ENST00000554427 397 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 MIR4524B-201ENST00000581569 115 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC067852.4-201ENST00000590314 478 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC007685.1-201ENST00000329806 452 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC067852.3-201ENST00000589177 561 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 VN1R8P-201ENST00000407739 893 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AL513124.1-201ENST00000450410 614 ntBASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSMD1Q96PZ7 AC005332.5-201ENST00000591222 2919 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 Z93242.1-201ENST00000427102 353 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 AL513175.1-201ENST00000431492 780 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 RPL7P38-201ENST00000488396 739 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 AC090312.2-201ENST00000582687 378 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 RNVU1-4-201ENST00000612985 164 ntBASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.96□□□□□ -1.93
CSMD1Q96PZ7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 VN1R48P-201ENST00000448149 1036 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 U3.44-201ENST00000458938 192 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 PPP1R11P1-201ENST00000486095 376 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AP001207.2-201ENST00000519490 539 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 NPM1P11-201ENST00000417106 855 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 MIR7851-201ENST00000610611 160 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 AL512643.1-201ENST00000635735 524 ntBASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSMD1Q96PZ7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 DBIP2-201ENST00000419076 262 ntBASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.95□□□□□ -1.94
CSMD1Q96PZ7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms