Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC007967.1-201ENST00000455422 1159 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 APOOP2-201ENST00000461561 539 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 RN7SL293P-201ENST00000481765 281 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.11□□□□□ -1.59
USP47Q96K76 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.11□□□□□ -1.59
USP47Q96K76 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.11□□□□□ -1.59
USP47Q96K76 AC020914.6-201ENST00000594327 272 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 AC018816.2-201ENST00000621460 353 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
USP47Q96K76 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.11□□□□□ -1.59
USP47Q96K76 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP47Q96K76 MTND4P26-201ENST00000415971 1359 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
USP47Q96K76 AC019072.1-201ENST00000604535 1551 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
USP47Q96K76 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
USP47Q96K76 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 AC007068.1-201ENST00000396690 844 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.1□□□□□ -1.59
USP47Q96K76 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.1□□□□□ -1.59
USP47Q96K76 AC073387.1-201ENST00000453261 709 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 RN7SL93P-201ENST00000463035 293 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AP000942.1-201ENST00000463969 747 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.1□□□□□ -1.59
USP47Q96K76 HMGN1P15-201ENST00000513870 295 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 RN7SKP83-201ENST00000516512 178 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.1□□□□□ -1.59
USP47Q96K76 AC027281.1-201ENST00000574178 758 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 MIR5195-201ENST00000583555 115 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AL589935.2-201ENST00000616471 1231 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 AL732618.1-201ENST00000623251 301 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 AC026523.2-201ENST00000625039 7739 ntBASIC5.1□□□□□ -1.59
USP47Q96K76 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP47Q96K76 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
USP47Q96K76 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP47Q96K76 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
USP47Q96K76 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP47Q96K76 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
USP47Q96K76 RNU6-283P-201ENST00000364788 107 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 RPS24P12-201ENST00000402084 394 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 LAP3P1-201ENST00000403648 294 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 MTHFD2P2-201ENST00000407725 247 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.09□□□□□ -1.59
USP47Q96K76 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.09□□□□□ -1.59
USP47Q96K76 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.09□□□□□ -1.59
USP47Q96K76 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP47Q96K76 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.09□□□□□ -1.59
USP47Q96K76 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.09□□□□□ -1.59
USP47Q96K76 AC106707.2-201ENST00000484182 374 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP47Q96K76 WBP1LP4-201ENST00000505043 344 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.09□□□□□ -1.59
USP47Q96K76 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.09□□□□□ -1.59
USP47Q96K76 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.09□□□□□ -1.59
USP47Q96K76 MIR3922-201ENST00000585192 84 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.09□□□□□ -1.59
USP47Q96K76 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 MIR7975-201ENST00000619350 68 ntBASIC5.09□□□□□ -1.59
USP47Q96K76 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.09□□□□□ -1.59
USP47Q96K76 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP47Q96K76 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.09□□□□□ -1.59
USP47Q96K76 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP47Q96K76 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.08□□□□□ -1.6
USP47Q96K76 AC007656.2-201ENST00000624902 4547 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USP47Q96K76 NDUFB4P4-201ENST00000404822 243 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AC017079.2-201ENST00000416102 485 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AC245052.5-201ENST00000416320 649 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.08□□□□□ -1.6
USP47Q96K76 AC010655.1-201ENST00000449336 292 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AL358832.1-201ENST00000497800 389 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.08□□□□□ -1.6
USP47Q96K76 RN7SKP13-201ENST00000515933 244 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 RN7SKP18-201ENST00000516005 275 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 MTND2P17-201ENST00000550281 688 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 BNIP3P11-201ENST00000603878 563 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AC087468.1-201ENST00000604365 630 ntBASIC5.08□□□□□ -1.6
USP47Q96K76 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
USP47Q96K76 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.08□□□□□ -1.6
USP47Q96K76 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USP47Q96K76 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.08□□□□□ -1.6
USP47Q96K76 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP47Q96K76 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP47Q96K76 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
USP47Q96K76 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP47Q96K76 RNU6-167P-201ENST00000384292 106 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 RNVU1-14-201ENST00000384770 164 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 AL589994.1-201ENST00000404962 340 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 Z92545.1-201ENST00000411782 234 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.07□□□□□ -1.6
USP47Q96K76 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.07□□□□□ -1.6
USP47Q96K76 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms