Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 SEPT7P7-201ENST00000420492 1301 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 SAGE4P-201ENST00000442271 3381 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 PABPC1P7-201ENST00000413177 1513 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL133383.2-201ENST00000622958 2336 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 RNVU1-6-201ENST00000364688 164 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 EIF5P1-201ENST00000400019 1231 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 RPL31P2-201ENST00000413849 377 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 BX664727.1-201ENST00000416024 466 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL009174.1-201ENST00000426577 416 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC011753.3-201ENST00000443436 406 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 MOB1AP2-201ENST00000446060 614 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC104306.1-201ENST00000449702 371 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 RPS15AP1-201ENST00000457423 391 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 CEACAMP4-201ENST00000457676 421 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC008379.1-201ENST00000463655 464 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC008628.1-201ENST00000508663 265 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC091868.1-201ENST00000508746 304 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 PRELID3BP4-201ENST00000515476 571 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 OR4R3P-201ENST00000525084 838 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC010928.3-201ENST00000587712 541 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC119501.1-201ENST00000603646 475 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC026741.1-201ENST00000605892 482 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 U73479.1-201ENST00000618062 168 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VMP1Q96GC9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VMP1Q96GC9 AC012618.3-205ENST00000637896 1496 ntBASIC4.43□□□□□ -1.7
VMP1Q96GC9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VMP1Q96GC9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VMP1Q96GC9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL031985.3-201ENST00000565390 2449 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VMP1Q96GC9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 RNU6-444P-201ENST00000383988 108 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RNU1-82P-201ENST00000390851 165 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 FABP12P1-201ENST00000401911 322 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 RN7SKP267-201ENST00000410381 285 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RPL23AP26-201ENST00000412728 464 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL591848.1-201ENST00000413092 322 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 UBE2V1P9-201ENST00000414760 368 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL590139.1-201ENST00000416267 400 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC008280.1-201ENST00000418851 412 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC246680.2-201ENST00000422106 389 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL645608.4-201ENST00000423619 154 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 EXTL2P1-201ENST00000446218 416 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 ATP5G1P3-201ENST00000463301 410 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 IGLV2-34-201ENST00000490007 283 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RNF138P1-201ENST00000502765 546 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 TRAV31-201ENST00000502780 342 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 RNU6-416P-201ENST00000516265 103 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC008802.1-201ENST00000519121 791 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL110118.1-201ENST00000553543 400 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC093249.4-201ENST00000564755 259 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
VMP1Q96GC9 AL121834.1-201ENST00000572284 509 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC022069.1-201ENST00000582910 658 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 RN7SL622P-201ENST00000585292 275 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 AC098483.2-201ENST00000603158 454 ntBASIC4.42□□□□□ -1.7
VMP1Q96GC9 HMGN2P28-201ENST00000606102 262 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms