Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 C1GALT1P3-201ENST00000522049 819 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AP001207.1-201ENST00000524051 481 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC137768.1-201ENST00000549998 553 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 PCNPP1-201ENST00000552501 511 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 NBEAP1-201ENST00000554452 979 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RNF138P2-201ENST00000603490 592 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC005084.1-201ENST00000605160 304 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 ZFRP1-201ENST00000457579 2970 ntBASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
CHMP4CQ96CF2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 RNA5SP505-201ENST00000364748 108 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC069213.2-201ENST00000420238 366 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MTND5P25-201ENST00000430499 799 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC073648.4-201ENST00000442655 781 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 RPL36AP15-201ENST00000444514 266 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 ANKRD26P4-201ENST00000455755 950 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC112206.1-201ENST00000468416 477 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC104689.1-201ENST00000473356 768 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AP001636.2-201ENST00000525517 696 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 SERPINE4P-201ENST00000554978 281 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MIR3667-201ENST00000581025 74 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 RN7SL52P-201ENST00000584271 284 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 BNIP3P26-201ENST00000600827 554 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 DPRXP5-201ENST00000604662 539 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC010424.2-201ENST00000607594 443 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MIR6820-201ENST00000611508 62 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 RN7SL722P-201ENST00000617780 284 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 RN7SL565P-201ENST00000618246 284 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MIR1322-201ENST00000638013 71 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC104454.1-201ENST00000421341 1401 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AC009643.2-201ENST00000603543 1448 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 AL672167.1-205ENST00000641112 3080 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 DBF4P1-201ENST00000412976 1892 ntBASIC5.73□□□□□ -1.49
CHMP4CQ96CF2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC008549.2-201ENST00000333482 706 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 Y_RNA.192-201ENST00000363977 102 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AL161909.1-201ENST00000397390 712 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 MIR1271-201ENST00000408537 86 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RNA5SP345-201ENST00000410646 108 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 NRBF2P2-201ENST00000413087 861 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC007559.1-201ENST00000428736 355 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC073143.1-201ENST00000436316 395 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms