Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RPL7P24-201ENST00000493052 752 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 HMGB1P21-201ENST00000502313 581 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 CKS1BP3-201ENST00000600888 237 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 U4.6-201ENST00000621618 127 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AL034403.1-201ENST00000399414 885 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 SNORA71B-202ENST00000439232 272 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AC080014.1-201ENST00000496877 1201 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AC138409.2-202ENST00000507274 458 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 VN1R78P-201ENST00000597393 564 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 USP8P1-201ENST00000494673 3183 ntBASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC168Q8NDH2 XGY1-201ENST00000381172 446 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 SNORD17-201ENST00000390930 237 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AL138885.1-201ENST00000405921 675 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AL450338.1-201ENST00000407987 512 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC009963.4-201ENST00000448535 339 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 RPS17P13-201ENST00000448974 407 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC108751.2-201ENST00000469993 231 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC073522.1-201ENST00000483312 377 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 MIR7702-201ENST00000621931 59 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AP000641.1-201ENST00000531988 1639 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 FTH1P1-201ENST00000437933 532 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC097262.1-201ENST00000452559 548 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC109925.1-201ENST00000478069 331 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC087369.1-201ENST00000520775 996 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC015802.5-201ENST00000607478 399 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 MIR7851-201ENST00000610611 160 ntBASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC168Q8NDH2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 NACAP7-201ENST00000407371 609 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AL024507.1-201ENST00000412741 274 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RPS21P8-201ENST00000413365 247 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RPL7P59-201ENST00000447700 943 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RNA5SP230-201ENST00000517039 122 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 LINC01355-201ENST00000566551 5444 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 HSPA8P17-201ENST00000427029 1382 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RPS23P10-201ENST00000416185 486 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AL445433.1-201ENST00000457507 257 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms