Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ABI1P1-201ENST00000603375 1120 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC092159.4-201ENST00000624944 550 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP443-201ENST00000363083 132 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 MTND2P11-201ENST00000423638 648 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 HMGB3P22-202ENST00000451823 572 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 RPS3AP6-201ENST00000484430 795 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 RNU6-751P-201ENST00000516382 101 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 AC087888.1-201ENST00000550884 1254 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 BMS1P7-201ENST00000602440 1052 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 HMGB1P51-201ENST00000605166 638 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 MAPK10-253ENST00000641010 4072 ntBASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC65Q8IXS2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 RNU1-13P-201ENST00000384499 162 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 RSL24D1P6-201ENST00000426934 401 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 RPS17P13-201ENST00000448974 407 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC109458.1-201ENST00000508858 316 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 MTCO1P35-201ENST00000515270 228 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 NDUFA5P2-201ENST00000519723 344 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 PARP1P2-201ENST00000556806 195 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AL049634.3-201ENST00000604968 457 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC65Q8IXS2 AC007342.7-201ENST00000624610 2337 ntBASIC4.34□□□□□ -1.72
CCDC65Q8IXS2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 MTCO1P8-201ENST00000416914 1523 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RNU6-819P-201ENST00000364116 107 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RNA5SP97-201ENST00000365006 84 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RNU6-152P-201ENST00000384037 107 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 SNORD65-201ENST00000391079 73 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 Z97055.1-201ENST00000419730 712 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RPL7P4-203ENST00000430239 730 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC006326.1-201ENST00000445465 787 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AL162151.2-201ENST00000448875 158 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 BUD31P2-201ENST00000449374 300 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 RN7SL385P-201ENST00000468873 276 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 NPM1P47-201ENST00000560843 856 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 AC136624.4-201ENST00000573044 370 ntBASIC4.33□□□□□ -1.72
CCDC65Q8IXS2 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms